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acs-13 AMP-binding domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 171643, updated on 6-Jul-2021

Summary

Gene symbol
acs-13
Gene description
AMP-binding domain-containing protein
Primary source
WormBase:WBGene00022037
Locus tag
CELE_Y65B4BL.5
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

See acs-13 in Genome Data Viewer
Location:
chromosome: I
Exon count:
7
Sequence:
Chromosome: I; NC_003279.8 (511044..519646, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene P-granule-associated protein deps-1 Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene ncRNA

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables long-chain fatty acid-CoA ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
AMP-binding domain-containing protein
NP_001293196.1
  • Confirmed by transcript evidence
NP_001368382.1
  • Confirmed by transcript evidence
NP_490744.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    511044..519646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_058343.5NP_490744.1  AMP-binding domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_490744.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9N302
    Conserved Domains (1) summary
    cd05927
    Location:140716
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
  2. NM_001306267.3NP_001293196.1  AMP-binding domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293196.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CLI5
    Conserved Domains (1) summary
    cd05927
    Location:147723
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
  3. NM_001379780.1NP_001368382.1  AMP-binding domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    Conserved Domains (1) summary
    cd05927
    Location:97673
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
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