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Angptl2 angiopoietin-like 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 171100, updated on 21-Jul-2018

Summary

Official Symbol
Angptl2provided by RGD
Official Full Name
angiopoietin-like 2provided by RGD
Primary source
RGD:620004
See related
Ensembl:ENSRNOG00000016678
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
may be associated with the angiotensin II type 1A receptor [RGD, Feb 2006]
Expression
Biased expression in Adrenal (RPKM 418.3), Heart (RPKM 328.9) and 9 other tissues See more
Orthologs

Genomic context

See Angptl2 in Genome Data Viewer
Location:
3p11
Exon count:
5
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (12262822..12292665)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 3 NC_005102.3 (17596289..17626136)

Chromosome 3 - NC_005102.4Genomic Context describing neighboring genes Neighboring gene solute carrier family 2 member 8 Neighboring gene GTPase activating Rap/RanGAP domain-like 3 Neighboring gene uncharacterized LOC102557449 Neighboring gene Ral GEF with PH domain and SH3 binding motif 1 Neighboring gene zinc finger and BTB domain containing 34 Neighboring gene zinc finger and BTB domain containing 43

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Homology

General protein information

Preferred Names
angiopoietin-related protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_133569.1NP_598253.1  angiopoietin-related protein 2 precursor

    See identical proteins and their annotated locations for NP_598253.1

    Status: PROVISIONAL

    Source sequence(s)
    AF159049
    UniProtKB/TrEMBL
    Q9JJ03
    Related
    ENSRNOP00000022585.3, ENSRNOT00000022585.3
    Conserved Domains (1) summary
    cd00087
    Location:273487
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005102.4 Reference Rnor_6.0 Primary Assembly

    Range
    12262822..12292665
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Rn_Celera

Genomic

  1. AC_000071.1 Alternate Rn_Celera

    Range
    11255293..11285095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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