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CYME_CMR358C hypothetical protein [ Cyanidioschyzon merolae strain 10D ]

Gene ID: 16997013, updated on 21-Dec-2023

Summary

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Gene symbol
CYME_CMR358C
Gene description
hypothetical protein
Locus tag
CYME_CMR358C
Gene type
protein coding
RNA name
hypothetical protein, conserved
RefSeq status
PROVISIONAL
Organism
Cyanidioschyzon merolae strain 10D (strain: 10D)
Lineage
Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon
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Genomic context

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See CYME_CMR358C in Genome Data Viewer
Location:
chromosome: 18
Exon count:
1
Sequence:
Chromosome: 18; NC_010144.1 (866685..868736, complement)

Chromosome 18 - NC_010144.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene probable DNA polymerase epsilon, subunit C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010144.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. Nozaki H, et al. BMC Biol, 2007 Jul 10. PMID 17623057, Free PMC Article
  2. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Matsuzaki M, et al. Nature, 2004 Apr 8. PMID 15071595
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010144.1 Reference assembly

    Range
    866685..868736 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005538534.1 → XP_005538591.1  hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]

    See identical proteins and their annotated locations for XP_005538591.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M1V6W0
    Conserved Domains (2) summary
    COG1442
    Location:501 → 652
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
    cl11394
    Location:392 → 663
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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