U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CYME_CMR340C similar to procollagen N-endopeptidase [ Cyanidioschyzon merolae strain 10D ]

Gene ID: 16996958, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
CYME_CMR340C
Gene description
similar to procollagen N-endopeptidase
Locus tag
CYME_CMR340C
Gene type
protein coding
RNA name
similar to procollagen N-endopeptidase
RefSeq status
PROVISIONAL
Organism
Cyanidioschyzon merolae strain 10D (strain: 10D)
Lineage
Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CYME_CMR340C in Genome Data Viewer
Location:
chromosome: 18
Exon count:
1
Sequence:
Chromosome: 18; NC_010144.1 (827831..828733)

Chromosome 18 - NC_010144.1Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene threonine synthase Neighboring gene similar to surfeit locus protein 4 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_010144.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. Nozaki H, et al. BMC Biol, 2007 Jul 10. PMID 17623057, Free PMC Article
  2. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Matsuzaki M, et al. Nature, 2004 Apr 8. PMID 15071595

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosome transport via multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in late endosome to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
similar to procollagen N-endopeptidase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010144.1 Reference assembly

    Range
    827831..828733
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005538523.1 → XP_005538580.1  similar to procollagen N-endopeptidase [Cyanidioschyzon merolae strain 10D]

    See identical proteins and their annotated locations for XP_005538580.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M1VBA3
    Conserved Domains (1) summary
    cl21588
    Location:142 → 298
    Snf7; Snf7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases