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CYME_CML129C similar to v-SNARE protein of ER-Golgi docking complex [ Cyanidioschyzon merolae strain 10D ]

Gene ID: 16994530, updated on 21-Dec-2023

Summary

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Gene symbol
CYME_CML129C
Gene description
similar to v-SNARE protein of ER-Golgi docking complex
Locus tag
CYME_CML129C
Gene type
protein coding
RNA name
similar to v-SNARE protein of ER-Golgi docking complex
RefSeq status
PROVISIONAL
Organism
Cyanidioschyzon merolae strain 10D (strain: 10D)
Lineage
Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon
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Genomic context

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Location:
chromosome: 12
Exon count:
1
Sequence:
Chromosome: 12; NC_010138.1 (293890..294501)

Chromosome 12 - NC_010138.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene tRNA nucleotidyltransferase Neighboring gene similar to transcription initiation factor TFIIE beta subunit Neighboring gene ATPases of the AAA+ class

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010138.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. Nozaki H, et al. BMC Biol, 2007 Jul 10. PMID 17623057, Free PMC Article
  2. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Matsuzaki M, et al. Nature, 2004 Apr 8. PMID 15071595

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
similar to v-SNARE protein of ER-Golgi docking complex

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010138.1 Reference assembly

    Range
    293890..294501
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005536717.1 → XP_005536774.1  similar to v-SNARE protein of ER-Golgi docking complex [Cyanidioschyzon merolae strain 10D]

    See identical proteins and their annotated locations for XP_005536774.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M1VI81
    Conserved Domains (3) summary
    COG5143
    Location:20 → 200
    SNC1; Synaptobrevin/VAMP-like protein [Intracellular trafficking and secretion]
    pfam13774
    Location:46 → 112
    Longin; Regulated-SNARE-like domain
    cl22856
    Location:141 → 200
    SNARE; SNARE motif
Nucleotide Protein
Heading Accession and Version

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