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CYME_CMK129C nitrate ABC transporter ATP-binding protein [ Cyanidioschyzon merolae strain 10D ]

Gene ID: 16994484, updated on 21-Dec-2023

Summary

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Gene symbol
CYME_CMK129C
Gene description
nitrate ABC transporter ATP-binding protein
Locus tag
CYME_CMK129C
Gene type
protein coding
RNA name
nitrate ABC transporter ATP-binding protein
RefSeq status
PROVISIONAL
Organism
Cyanidioschyzon merolae strain 10D (strain: 10D)
Lineage
Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon
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Genomic context

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Location:
chromosome: 11
Exon count:
1
Sequence:
Chromosome: 11; NC_010137.1 (348770..350731)

Chromosome 11 - NC_010137.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene enolase Neighboring gene probable transcription initiation factor TFIID, subunit TAF10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010137.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. Nozaki H, et al. BMC Biol, 2007 Jul 10. PMID 17623057, Free PMC Article
  2. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Matsuzaki M, et al. Nature, 2004 Apr 8. PMID 15071595

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
nitrate ABC transporter ATP-binding protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010137.1 Reference assembly

    Range
    348770..350731
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005536487.1 → XP_005536544.1  nitrate ABC transporter ATP-binding protein [Cyanidioschyzon merolae strain 10D]

    See identical proteins and their annotated locations for XP_005536544.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M1VHS9
    Conserved Domains (3) summary
    cd03293
    Location:106 → 323
    ABC_NrtD_SsuB_transporters; ATP-binding cassette domain of the nitrate and sulfonate transporters
    COG1116
    Location:108 → 345
    TauB; ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
    pfam09821
    Location:480 → 599
    AAA_assoc_C; C-terminal AAA-associated domain
Nucleotide Protein
Heading Accession and Version

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