U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CYME_CMK020C similar to glycogenin [ Cyanidioschyzon merolae strain 10D ]

Gene ID: 16994367, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
CYME_CMK020C
Gene description
similar to glycogenin
Locus tag
CYME_CMK020C
Gene type
protein coding
RNA name
similar to glycogenin
RefSeq status
PROVISIONAL
Organism
Cyanidioschyzon merolae strain 10D (strain: 10D)
Lineage
Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CYME_CMK020C in Genome Data Viewer
Location:
chromosome: 11
Exon count:
1
Sequence:
Chromosome: 11; NC_010137.1 (54200..56125, complement)

Chromosome 11 - NC_010137.1Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene similar to low affinity potassium transport; Trk2p Neighboring gene miscRNA Neighboring gene similar to Sm protein B

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_010137.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. Nozaki H, et al. BMC Biol, 2007 Jul 10. PMID 17623057, Free PMC Article
  2. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Matsuzaki M, et al. Nature, 2004 Apr 8. PMID 15071595
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
similar to glycogenin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010137.1 Reference assembly

    Range
    54200..56125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005536398.1 → XP_005536455.1  similar to glycogenin [Cyanidioschyzon merolae strain 10D]

    See identical proteins and their annotated locations for XP_005536455.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M1V890
    Conserved Domains (1) summary
    cl11394
    Location:81 → 347
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases