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ZNF800 zinc finger protein 800 [ Homo sapiens (human) ]

Gene ID: 168850, updated on 13-Mar-2020

Summary

Official Symbol
ZNF800provided by HGNC
Official Full Name
zinc finger protein 800provided by HGNC
Primary source
HGNC:HGNC:27267
See related
Ensembl:ENSG00000048405
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in bone marrow (RPKM 4.8), testis (RPKM 2.3) and 25 other tissues See more
Orthologs

Genomic context

See ZNF800 in Genome Data Viewer
Location:
7q31.33
Exon count:
7
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (127342871..127392798, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (127010097..127032778, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene glutamate metabotropic receptor 8 Neighboring gene GRM8 antisense RNA 1 Neighboring gene PRELI domain containing 3B pseudogene 10 Neighboring gene uncharacterized LOC100506682 Neighboring gene uncharacterized LOC105375490 Neighboring gene VISTA enhancer hs1308

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ43301, MGC130032, MGC130033

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_176814.5NP_789784.2  zinc finger protein 800

    See identical proteins and their annotated locations for NP_789784.2

    Status: VALIDATED

    Source sequence(s)
    AK309674, BC110623, BG112338, BU581251, DA888007
    Consensus CDS
    CCDS5795.1
    UniProtKB/Swiss-Prot
    Q2TB10
    Related
    ENSP00000265827.3, ENST00000265827.8
    Conserved Domains (3) summary
    sd00019
    Location:488508
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:355383
    zf-C2H2_11; zinc-finger C2H2-type
    pfam16624
    Location:391485
    zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    127342871..127392798 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006715868.4XP_006715931.1  zinc finger protein 800 isoform X1

    See identical proteins and their annotated locations for XP_006715931.1

    Conserved Domains (4) summary
    sd00019
    Location:488508
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:618640
    zf-C2H2; Zinc finger, C2H2 type
    pfam16622
    Location:355383
    zf-C2H2_11; zinc-finger C2H2-type
    pfam16624
    Location:391485
    zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger
  2. XM_006715869.4XP_006715932.1  zinc finger protein 800 isoform X2

    Conserved Domains (4) summary
    sd00019
    Location:456476
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:586608
    zf-C2H2; Zinc finger, C2H2 type
    pfam16622
    Location:323351
    zf-C2H2_11; zinc-finger C2H2-type
    pfam16624
    Location:359453
    zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger
  3. XM_006715867.4XP_006715930.1  zinc finger protein 800 isoform X1

    See identical proteins and their annotated locations for XP_006715930.1

    Conserved Domains (4) summary
    sd00019
    Location:488508
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:618640
    zf-C2H2; Zinc finger, C2H2 type
    pfam16622
    Location:355383
    zf-C2H2_11; zinc-finger C2H2-type
    pfam16624
    Location:391485
    zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger
  4. XM_011515859.3XP_011514161.1  zinc finger protein 800 isoform X1

    See identical proteins and their annotated locations for XP_011514161.1

    Conserved Domains (4) summary
    sd00019
    Location:488508
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:618640
    zf-C2H2; Zinc finger, C2H2 type
    pfam16622
    Location:355383
    zf-C2H2_11; zinc-finger C2H2-type
    pfam16624
    Location:391485
    zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger
  5. XM_005250181.4XP_005250238.1  zinc finger protein 800 isoform X3

    See identical proteins and their annotated locations for XP_005250238.1

    UniProtKB/Swiss-Prot
    Q2TB10
    Conserved Domains (3) summary
    sd00019
    Location:488508
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:355383
    zf-C2H2_11; zinc-finger C2H2-type
    pfam16624
    Location:391485
    zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger
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