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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001297598.2 → NP_001284527.1 mesoderm induction early response protein 3 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AC008937, AC016644
- Consensus CDS
-
CCDS78011.1
- UniProtKB/Swiss-Prot
-
Q7Z3K6
- Related
- ENSP00000370624.3, ENST00000381226.7
- Conserved Domains (3) summary
-
- smart00717
Location:285 → 332
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- cd11661
Location:287 → 331
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- pfam01448
Location:181 → 229
- ELM2; ELM2 domain
-
NM_001297599.2 → NP_001284528.1 mesoderm induction early response protein 3 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) has an alternate splice site in the coding region but maintains the reading frame, compared to variant 1. The resulting isoform (2) lacks an internal segment, compared to isoform 1.
- Source sequence(s)
-
AC008937, AC016644
- Consensus CDS
-
CCDS75248.1
- UniProtKB/Swiss-Prot
- B4DRI9, B8ZZQ0, Q5CZI0, Q68CS3, Q6MZS7, Q7Z3K6, Q86YG8, Q8NA13
- Related
- ENSP00000370596.3, ENST00000381199.8
- Conserved Domains (2) summary
-
- cd11661
Location:282 → 326
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- pfam01448
Location:176 → 224
- ELM2; ELM2 domain
-
NM_152622.5 → NP_689835.3 mesoderm induction early response protein 3 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) has two alternate splice sites in the coding region but maintains the reading frame, compared to variant 1. The resulting isoform (3) lacks an internal segment and an internal aa, compared to isoform 1.
- Source sequence(s)
-
AC008937, AC016644
- Consensus CDS
-
CCDS3973.2
- UniProtKB/Swiss-Prot
-
Q7Z3K6
- Related
- ENSP00000370611.3, ENST00000381213.7
- Conserved Domains (2) summary
-
- cd11661
Location:281 → 325
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- pfam01448
Location:176 → 224
- ELM2; ELM2 domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
56919603..56952209 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047416840.1 → XP_047272796.1 mesoderm induction early response protein 3 isoform X3
-
XM_011543217.3 → XP_011541519.1 mesoderm induction early response protein 3 isoform X2
- Conserved Domains (3) summary
-
- smart00717
Location:295 → 342
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- cd11661
Location:297 → 341
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- pfam01448
Location:192 → 240
- ELM2; ELM2 domain
-
XM_011543216.3 → XP_011541518.1 mesoderm induction early response protein 3 isoform X1
- Conserved Domains (2) summary
-
- cd11661
Location:298 → 342
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- pfam01448
Location:192 → 240
- ELM2; ELM2 domain
-
XM_047416839.1 → XP_047272795.1 mesoderm induction early response protein 3 isoform X3
- Related
- ENSP00000386584.1, ENST00000409421.5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
57747855..57780385 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054351878.1 → XP_054207853.1 mesoderm induction early response protein 3 isoform X2
-
XM_054351877.1 → XP_054207852.1 mesoderm induction early response protein 3 isoform X1