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Krt15 keratin 15 [ Mus musculus (house mouse) ]

Gene ID: 16665, updated on 26-Nov-2019

Summary

Official Symbol
Krt15provided by MGI
Official Full Name
keratin 15provided by MGI
Primary source
MGI:MGI:96689
See related
Ensembl:ENSMUSG00000054146
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
K15; Krt1-15; AI528832
Expression
Biased expression in bladder adult (RPKM 231.5), limb E14.5 (RPKM 52.7) and 1 other tissue See more
Orthologs

Genomic context

See Krt15 in Genome Data Viewer
Location:
11 D; 11 63.41 cM
Exon count:
8
Annotation release Status Assembly Chr Location
108 current GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (100131759..100135949, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (99993073..99997263, complement)

Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene keratin 36 Neighboring gene keratin 13 Neighboring gene keratin 19 Neighboring gene predicted gene, 39022

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
scaffold protein binding ISO
Inferred from Sequence Orthology
more info
 
structural molecule activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
intermediate filament IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
keratin, type I cytoskeletal 15
Names
CK-15
cytokeratin-15
keratin complex 1, acidic, gene 15

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008469.2NP_032495.2  keratin, type I cytoskeletal 15

    See identical proteins and their annotated locations for NP_032495.2

    Status: VALIDATED

    Source sequence(s)
    BY061070, BY107287, BY436080, CA451823, CN456368
    Consensus CDS
    CCDS25410.2
    UniProtKB/Swiss-Prot
    Q61414
    UniProtKB/TrEMBL
    B1AQ77
    Related
    ENSMUSP00000103034.2, ENSMUST00000107411.2
    Conserved Domains (1) summary
    pfam00038
    Location:97409
    Filament; Intermediate filament protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p6 C57BL/6J

Genomic

  1. NC_000077.6 Reference GRCm38.p6 C57BL/6J

    Range
    100131759..100135949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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