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Kif13a kinesin family member 13A [ Mus musculus (house mouse) ]

Gene ID: 16553, updated on 19-Mar-2019

Summary

Official Symbol
Kif13aprovided by MGI
Official Full Name
kinesin family member 13Aprovided by MGI
Primary source
MGI:MGI:1098264
See related
Ensembl:ENSMUSG00000021375
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
mKIAA4109; 4930505I07Rik
Expression
Ubiquitous expression in heart adult (RPKM 9.1), lung adult (RPKM 8.2) and 28 other tissues See more
Orthologs

Genomic context

See Kif13a in Genome Data Viewer
Location:
13; 13 A5
Exon count:
41
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 13 NC_000079.6 (46749087..46931302, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (46844456..47025087, complement)

Chromosome 13 - NC_000079.6Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 8, member A1 Neighboring gene nucleoporin 153 Neighboring gene predicted gene, 46412 Neighboring gene coronin, actin binding protein 1C pseudogene Neighboring gene NHL repeat containing 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Homology

Clone Names

  • KIAA4109

Gene Ontology Provided by MGI

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
ATPase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
microtubule binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
microtubule motor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
microtubule motor activity IDA
Inferred from Direct Assay
more info
PubMed 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
Golgi to plasma membrane protein transport IDA
Inferred from Direct Assay
more info
PubMed 
cargo loading into vesicle ISO
Inferred from Sequence Orthology
more info
 
cell cycle IEA
Inferred from Electronic Annotation
more info
 
cell division IEA
Inferred from Electronic Annotation
more info
 
endosome to lysosome transport ISO
Inferred from Sequence Orthology
more info
 
intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
intracellular protein transport ISO
Inferred from Sequence Orthology
more info
 
melanosome organization ISO
Inferred from Sequence Orthology
more info
 
microtubule-based movement IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
plus-end-directed vesicle transport along microtubule IDA
Inferred from Direct Assay
more info
PubMed 
protein transport IEA
Inferred from Electronic Annotation
more info
 
regulation of cytokinesis ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
centrosome ISO
Inferred from Sequence Orthology
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
endosome IEA
Inferred from Electronic Annotation
more info
 
endosome membrane ISO
Inferred from Sequence Orthology
more info
 
kinesin complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 
microtubule IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
midbody ISO
Inferred from Sequence Orthology
more info
 
trans-Golgi network membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
kinesin-like protein KIF13A
Names
N-3 kinesin
kinesin 13A

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010617.2NP_034747.2  kinesin-like protein KIF13A

    See identical proteins and their annotated locations for NP_034747.2

    Status: VALIDATED

    Source sequence(s)
    AC124598, AC134913
    Consensus CDS
    CCDS36652.1
    UniProtKB/TrEMBL
    F8VQ75
    Related
    ENSMUSP00000055304.7, ENSMUST00000056978.7
    Conserved Domains (6) summary
    smart00129
    Location:6359
    KISc; Kinesin motor, catalytic domain. ATPase
    cd00060
    Location:446543
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:5359
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:748792
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:12111270
    DUF3694; Kinesin protein
    pfam16183
    Location:356468
    Kinesin_assoc; Kinesin-associated

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000079.6 Reference GRCm38.p4 C57BL/6J

    Range
    46749087..46931302 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006516861.3XP_006516924.1  kinesin-like protein KIF13A isoform X1

    Conserved Domains (6) summary
    smart00129
    Location:6359
    KISc; Kinesin motor, catalytic domain. ATPase
    cd00060
    Location:446543
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:5359
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:748792
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:12241283
    DUF3694; Kinesin protein
    pfam16183
    Location:356468
    Kinesin_assoc; Kinesin-associated
  2. XM_011244374.2XP_011242676.1  kinesin-like protein KIF13A isoform X3

    Conserved Domains (6) summary
    smart00129
    Location:6359
    KISc; Kinesin motor, catalytic domain. ATPase
    cd00060
    Location:446543
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:5359
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:748792
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:12111270
    DUF3694; Kinesin protein
    pfam16183
    Location:356468
    Kinesin_assoc; Kinesin-associated
  3. XM_011244375.2XP_011242677.1  kinesin-like protein KIF13A isoform X5

    Conserved Domains (6) summary
    smart00129
    Location:6359
    KISc; Kinesin motor, catalytic domain. ATPase
    cd00060
    Location:446543
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:5359
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:748792
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:12241283
    DUF3694; Kinesin protein
    pfam16183
    Location:356468
    Kinesin_assoc; Kinesin-associated
  4. XM_011244376.2XP_011242678.1  kinesin-like protein KIF13A isoform X7

    Conserved Domains (6) summary
    smart00129
    Location:6359
    KISc; Kinesin motor, catalytic domain. ATPase
    cd00060
    Location:446543
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:5359
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:748792
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:12111270
    DUF3694; Kinesin protein
    pfam16183
    Location:356468
    Kinesin_assoc; Kinesin-associated
  5. XM_006516862.3XP_006516925.1  kinesin-like protein KIF13A isoform X2

    Conserved Domains (6) summary
    smart00129
    Location:6359
    KISc; Kinesin motor, catalytic domain. ATPase
    cd00060
    Location:446543
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:5359
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:748792
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:12241283
    DUF3694; Kinesin protein
    pfam16183
    Location:356468
    Kinesin_assoc; Kinesin-associated
  6. XM_006516864.3XP_006516927.1  kinesin-like protein KIF13A isoform X4

    Conserved Domains (6) summary
    smart00129
    Location:6359
    KISc; Kinesin motor, catalytic domain. ATPase
    cd00060
    Location:446543
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:5359
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:748792
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:12111270
    DUF3694; Kinesin protein
    pfam16183
    Location:356468
    Kinesin_assoc; Kinesin-associated
  7. XM_017315400.1XP_017170889.1  kinesin-like protein KIF13A isoform X6

  8. XM_011244377.2XP_011242679.1  kinesin-like protein KIF13A isoform X8

    Conserved Domains (6) summary
    smart00129
    Location:9296
    KISc; Kinesin motor, catalytic domain. ATPase
    cd00060
    Location:383480
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cl22853
    Location:3296
    Motor_domain; Myosin and Kinesin motor domain
    pfam12423
    Location:685729
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:11611220
    DUF3694; Kinesin protein
    pfam16183
    Location:293405
    Kinesin_assoc; Kinesin-associated
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