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C1QL2 complement C1q like 2 [ Homo sapiens (human) ]

Gene ID: 165257, updated on 1-Jun-2020

Summary

Official Symbol
C1QL2provided by HGNC
Official Full Name
complement C1q like 2provided by HGNC
Primary source
HGNC:HGNC:24181
See related
Ensembl:ENSG00000144119 MIM:614330
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CTRP10; C1QTNF10
Expression
Low expression observed in reference dataset See more
Orthologs

Genomic context

See C1QL2 in Genome Data Viewer
Location:
2q14.2
Exon count:
2
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (119156243..119158751, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (119913819..119916471, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene engrailed homeobox 1 Neighboring gene macrophage receptor with collagenous structure Neighboring gene uncharacterized LOC107985941 Neighboring gene RNA, 7SL, cytoplasmic 468, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

NHGRI GWAS Catalog

Description
Genetic Loci Associated with Circulating Levels of Very Long-Chain Saturated Fatty Acids.
NHGRI GWA Catalog

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
identical protein binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
collagen trimer IEA
Inferred from Electronic Annotation
more info
 
extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
complement C1q-like protein 2
Names
C1q and tumor necrosis factor-related protein 10
C1q-domain containing protein
C1q/TNF-related protein 10
complement component 1, q subcomponent-like 2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_182528.4NP_872334.2  complement C1q-like protein 2 precursor

    See identical proteins and their annotated locations for NP_872334.2

    Status: VALIDATED

    Source sequence(s)
    AC016673
    Consensus CDS
    CCDS42737.1
    UniProtKB/Swiss-Prot
    Q7Z5L3
    Related
    ENSP00000272520.3, ENST00000272520.4
    Conserved Domains (1) summary
    pfam00386
    Location:160284
    C1q; C1q domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    119156243..119158751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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