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TTC24 tetratricopeptide repeat domain 24 [ Homo sapiens (human) ]

Gene ID: 164118, updated on 5-Aug-2022

Summary

Official Symbol
TTC24provided by HGNC
Official Full Name
tetratricopeptide repeat domain 24provided by HGNC
Primary source
HGNC:HGNC:32348
See related
Ensembl:ENSG00000187862 AllianceGenome:HGNC:32348
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in lymph node (RPKM 3.0), spleen (RPKM 1.9) and 3 other tissues See more
Orthologs
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Genomic context

See TTC24 in Genome Data Viewer
Location:
1q22
Exon count:
10
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (156579723..156587719)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (155716091..155724087)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (156549515..156557511)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene myocyte enhancer factor 2D Neighboring gene small nucleolar RNA U13 Neighboring gene IQ motif containing GTPase activating protein 3 Neighboring gene G-patch domain containing 4 (gene/pseudogene) Neighboring gene NAD(P)HX epimerase

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Homology

Clone Names

  • FLJ20249

General protein information

Preferred Names
tetratricopeptide repeat protein 24
Names
TPR repeat protein 24

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001105669.4NP_001099139.2  tetratricopeptide repeat protein 24

    See identical proteins and their annotated locations for NP_001099139.2

    Status: VALIDATED

    Source sequence(s)
    AL365181
    Consensus CDS
    CCDS53379.1
    UniProtKB/Swiss-Prot
    A2A3L6, Q5T3H7
    Related
    ENSP00000357219.3, ENST00000368236.8
    Conserved Domains (5) summary
    smart00028
    Location:273302
    TPR; Tetratricopeptide repeats
    sd00006
    Location:273301
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:353380
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:121180
    TPR_11; TPR repeat
    pfam13424
    Location:271345
    TPR_12; Tetratricopeptide repeat

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    156579723..156587719
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047447969.1XP_047303925.1  tetratricopeptide repeat protein 24 isoform X3

  2. XM_011509253.3XP_011507555.2  tetratricopeptide repeat protein 24 isoform X1

  3. XM_011509255.3XP_011507557.2  tetratricopeptide repeat protein 24 isoform X4

  4. XM_047447973.1XP_047303929.1  tetratricopeptide repeat protein 24 isoform X6

  5. XM_011509254.3XP_011507556.2  tetratricopeptide repeat protein 24 isoform X2

  6. XM_047447971.1XP_047303927.1  tetratricopeptide repeat protein 24 isoform X5

  7. XM_047447977.1XP_047303933.1  tetratricopeptide repeat protein 24 isoform X8

  8. XM_047447975.1XP_047303931.1  tetratricopeptide repeat protein 24 isoform X7

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791758.1 Reference GRCh38.p14 PATCHES

    Range
    138280..146276
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    155716091..155724087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)