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PRR22 proline rich 22 [ Homo sapiens (human) ]

Gene ID: 163154, updated on 5-Aug-2022

Summary

Official Symbol
PRR22provided by HGNC
Official Full Name
proline rich 22provided by HGNC
Primary source
HGNC:HGNC:28354
See related
Ensembl:ENSG00000212123 AllianceGenome:HGNC:28354
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 10.8), skin (RPKM 1.5) and 13 other tissues See more
Orthologs
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Genomic context

See PRR22 in Genome Data Viewer
Location:
19p13.3
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (5782960..5784746, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (5769757..5771543, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (5782971..5784757, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene ribosomal protein L36 Neighboring gene lon peptidase 1, mitochondrial Neighboring gene cation channel sperm associated auxiliary subunit delta Neighboring gene dihydrouridine synthase 3 like Neighboring gene Sharpr-MPRA regulatory region 11822

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC24975

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001134316.2NP_001127788.1  proline-rich protein 22

    See identical proteins and their annotated locations for NP_001127788.1

    Status: VALIDATED

    Source sequence(s)
    BC008985, CN370733
    Consensus CDS
    CCDS45933.1
    UniProtKB/Swiss-Prot
    E9PB31, Q8IZ63
    Related
    ENSP00000407653.2, ENST00000419421.3
    Conserved Domains (1) summary
    pfam15776
    Location:63422
    PRR22; Proline-rich protein family 22

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    5782960..5784746 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    5769757..5771543 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_153359.1: Suppressed sequence

    Description
    NM_153359.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.