Format

Send to:

Choose Destination

ITPRIPL2 ITPRIP like 2 [ Homo sapiens (human) ]

Gene ID: 162073, updated on 14-Jun-2020

Summary

Official Symbol
ITPRIPL2provided by HGNC
Official Full Name
ITPRIP like 2provided by HGNC
Primary source
HGNC:HGNC:27257
See related
Ensembl:ENSG00000205730
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in skin (RPKM 11.3), fat (RPKM 11.0) and 24 other tissues See more
Orthologs

Genomic context

See ITPRIPL2 in Genome Data Viewer
Location:
16p12.3
Exon count:
2
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (19113932..19121630)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (19125254..19132952)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 1340, pseudogene Neighboring gene transmembrane channel like 7 Neighboring gene uncharacterized LOC102723385 Neighboring gene coenzyme Q7, hydroxylase Neighboring gene synaptotagmin 17 Neighboring gene uncharacterized LOC105371114 Neighboring gene C-type lectin domain containing 19A

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ22994, MGC126798, MGC126800

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
inositol 1,4,5-trisphosphate receptor-interacting protein-like 2
Names
inositol 1,4,5-triphosphate receptor-interacting protein-like 2
inositol 1,4,5-trisphosphate receptor interacting protein like 2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001034841.4NP_001030013.1  inositol 1,4,5-trisphosphate receptor-interacting protein-like 2 precursor

    See identical proteins and their annotated locations for NP_001030013.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the functional protein.
    Source sequence(s)
    AC099518
    Consensus CDS
    CCDS32395.1
    UniProtKB/Swiss-Prot
    Q3MIP1
    Related
    ENSP00000370849.3, ENST00000381440.4
    Conserved Domains (1) summary
    pfam03281
    Location:246453
    Mab-21; Mab-21 protein

RNA

  1. NR_028028.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate internal segment, compared to variant 1. This variant is represented as non-coding because it lacks a large portion of the coding region, including the translational start codon, found in variant 1.
    Source sequence(s)
    AC099518, AK096327, BG116542

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    19113932..19121630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center