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Il5 interleukin 5 [ Mus musculus (house mouse) ]

Gene ID: 16191, updated on 5-Nov-2021

Summary

Official Symbol
Il5provided by MGI
Official Full Name
interleukin 5provided by MGI
Primary source
MGI:MGI:96557
See related
Ensembl:ENSMUSG00000036117
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Il-5
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Il5 in Genome Data Viewer
Location:
11 B1.3; 11 31.99 cM
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (53611621..53615930)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (53720794..53725103)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (53534296..53538605)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein S2, pseudogene 4 Neighboring gene Th2 cytokine locus control region Neighboring gene RAD50 double strand break repair protein Neighboring gene microRNA 7671 Neighboring gene interferon regulatory factor 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables cytokine activity IDA
Inferred from Direct Assay
more info
PubMed 
enables cytokine activity ISO
Inferred from Sequence Orthology
more info
 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 
enables interleukin-5 receptor binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in extracellular region ISO
Inferred from Sequence Orthology
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
interleukin-5
Names
B-cell growth factor II
BCGF-II
T-cell replacing factor
TRF
cytotoxic T-lymphocyte inducer
eosinophil differentiation factor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010558.1NP_034688.1  interleukin-5 precursor

    See identical proteins and their annotated locations for NP_034688.1

    Status: VALIDATED

    Source sequence(s)
    X06270
    Consensus CDS
    CCDS24685.1
    UniProtKB/Swiss-Prot
    P04401
    UniProtKB/TrEMBL
    Q5SV01
    Related
    ENSMUSP00000043369.3, ENSMUST00000048605.3
    Conserved Domains (1) summary
    pfam02025
    Location:21132
    IL5; Interleukin 5

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    53611621..53615930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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