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SAMD15 sterile alpha motif domain containing 15 [ Homo sapiens (human) ]

Gene ID: 161394, updated on 18-Aug-2020

Summary

Official Symbol
SAMD15provided by HGNC
Official Full Name
sterile alpha motif domain containing 15provided by HGNC
Primary source
HGNC:HGNC:18631
See related
Ensembl:ENSG00000100583
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM15A; C14orf174
Expression
Biased expression in testis (RPKM 14.6), thyroid (RPKM 2.9) and 2 other tissues See more
Orthologs

Genomic context

See SAMD15 in Genome Data Viewer
Location:
14q24.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (77377378..77391300)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (77843762..77857587)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase zeta 1 Neighboring gene transmembrane p24 trafficking protein family member 8 Neighboring gene ATP binding cassette subfamily G member 2 (Junior blood group) pseudogene Neighboring gene HNF1 motif-containing MPRA enhancer 277 Neighboring gene NADP dependent oxidoreductase domain containing 1 Neighboring gene VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Clone Names

  • FLJ35963, MGC132494, MGC132496

General protein information

Preferred Names
sterile alpha motif domain-containing protein 15
Names
SAM domain-containing protein 15
SAM domain-containing protein C14orf174
family with sequence similarity 15, member A

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001010860.2NP_001010860.1  sterile alpha motif domain-containing protein 15

    See identical proteins and their annotated locations for NP_001010860.1

    Status: VALIDATED

    Source sequence(s)
    AC007954
    Consensus CDS
    CCDS32126.1
    UniProtKB/Swiss-Prot
    Q9P1V8
    Related
    ENSP00000216471.4, ENST00000216471.4
    Conserved Domains (3) summary
    cd09530
    Location:543609
    SAM_Samd14; SAM domain of Samd14 subfamily
    smart00454
    Location:544607
    SAM; Sterile alpha motif
    TIGR02223
    Location:137310
    ftsN; cell division protein FtsN

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    77377378..77391300
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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