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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001001877.2 → NP_001001877.1 heat shock transcription factor, Y-linked isoform 2
See identical proteins and their annotated locations for NP_001001877.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) includes a different exon in the 3' coding region, resulting in a frameshift and earlier termination codon, compared to variant 1. The resulting isoform (2) is shorter and has a distinct C-terminus compared to isoform 1. Isoform 2 lacks the HFS-type DNA-binding domain found in isoform 1.
- Source sequence(s)
-
AC007379
- Consensus CDS
-
CCDS35476.1
- UniProtKB/Swiss-Prot
-
Q96LI6
- Related
- ENSP00000340971.4, ENST00000344884.4
- Conserved Domains (1) summary
-
- pfam00447
Location:86 → 154
- HSF_DNA-bind; HSF-type DNA-binding
-
NM_153716.2 → NP_714927.1 heat shock transcription factor, Y-linked isoform 1
See identical proteins and their annotated locations for NP_714927.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1) of this protein. Isoform 1 has an HSF-type DNA-binding motif.
- Source sequence(s)
-
AC007379, AK058182
- Consensus CDS
-
CCDS14791.1
- UniProtKB/Swiss-Prot
- Q96LI6, Q9BZA3
- Related
- ENSP00000306549.3, ENST00000304790.3
- Conserved Domains (1) summary
-
- pfam00447
Location:80 → 194
- HSF_DNA-bind; HSF-type DNA-binding
RNA
-
NR_003509.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) has an alternate 3' splice pattern, compared to variant 1. The transcript is sufficiently abundant to represent as a RefSeq record; however, the predicted protein is not represented because the transcript is a candidate for nonsense-mediated decay (NMD).
- Source sequence(s)
-
AC007379
- Related
-
ENST00000491902.1