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PABIR2 PABIR family member 2 [ Homo sapiens (human) ]

Gene ID: 159090, updated on 8-Jul-2021

Summary

Official Symbol
PABIR2provided by HGNC
Official Full Name
PABIR family member 2provided by HGNC
Primary source
HGNC:HGNC:30490
See related
Ensembl:ENSG00000156504
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM122B; SPACIA2
Expression
Ubiquitous expression in testis (RPKM 18.1), lymph node (RPKM 11.4) and 25 other tissues See more
Orthologs
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Genomic context

See PABIR2 in Genome Data Viewer
Location:
Xq26.3
Exon count:
11
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (134769566..134797217, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (133903596..133931235, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene placenta enriched 1 Neighboring gene ribosomal protein S7 pseudogene 12 Neighboring gene RNA, U4 small nuclear 44, pseudogene Neighboring gene PABIR family member 3 Neighboring gene motile sperm domain containing 1 Neighboring gene RNA, U6 small nuclear 616, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC131814, DKFZp686L20116

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein serine/threonine phosphatase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in negative regulation of catalytic activity IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
PABIR family member 2
Names
family with sequence similarity 122B
protein FAM122B
synoviocyte proliferation associated in collagen-induced arthritis 2

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_016348.1 RefSeqGene

    Range
    5878..32667
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001166599.3NP_001160071.1  PABIR family member 2 isoform 2

    See identical proteins and their annotated locations for NP_001160071.1

    Status: VALIDATED

    Source sequence(s)
    BC019221, BX538218
    Consensus CDS
    CCDS55497.1
    UniProtKB/Swiss-Prot
    Q7Z309
    Related
    ENSP00000359826.1, ENST00000370790.5
  2. NM_001166600.3NP_001160072.1  PABIR family member 2 isoform 3

    See identical proteins and their annotated locations for NP_001160072.1

    Status: VALIDATED

    Source sequence(s)
    AK124650, BX538218
    Consensus CDS
    CCDS55498.1
    UniProtKB/Swiss-Prot
    Q7Z309
    UniProtKB/TrEMBL
    B4DN12, G1UD80
    Related
    ENSP00000298090.6, ENST00000298090.10
  3. NM_001170756.1NP_001164227.1  PABIR family member 2 isoform 4

    See identical proteins and their annotated locations for NP_001164227.1

    Status: VALIDATED

    Source sequence(s)
    AK125991, BC019221, BX538218
    Consensus CDS
    CCDS55499.1
    UniProtKB/Swiss-Prot
    Q7Z309
    Related
    ENSP00000487221.1, ENST00000493333.5
  4. NM_001170757.2NP_001164228.1  PABIR family member 2 isoform 5

    See identical proteins and their annotated locations for NP_001164228.1

    Status: VALIDATED

    Source sequence(s)
    AK124650, AK297720, BX538218
    UniProtKB/Swiss-Prot
    Q7Z309
    UniProtKB/TrEMBL
    B4DN12
  5. NM_001331088.1NP_001318017.1  PABIR family member 2 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AL672032, AL691477
  6. NM_001331089.1NP_001318018.1  PABIR family member 2 isoform 7

    Status: VALIDATED

    Source sequence(s)
    AL672032, AL691477
  7. NM_001331090.1NP_001318019.1  PABIR family member 2 isoform 8

    Status: VALIDATED

    Source sequence(s)
    AL672032, AL691477
  8. NM_001331091.1NP_001318020.1  PABIR family member 2 isoform 9

    Status: VALIDATED

    Source sequence(s)
    AL672032, AL691477
  9. NM_001331092.1NP_001318021.1  PABIR family member 2 isoform 10

    Status: VALIDATED

    Source sequence(s)
    AL672032, AL691477
  10. NM_001331093.1NP_001318022.1  PABIR family member 2 isoform 11

    Status: VALIDATED

    Source sequence(s)
    AL672032, AL691477
  11. NM_001331094.1NP_001318023.1  PABIR family member 2 isoform 12

    Status: VALIDATED

    Source sequence(s)
    AL672032, AL691477
  12. NM_001387468.1NP_001374397.1  PABIR family member 2 isoform 13

    Status: VALIDATED

    Source sequence(s)
    AL672032, AL691477
    Related
    ENSP00000339207.6, ENST00000343004.10
  13. NM_001387469.1NP_001374398.1  PABIR family member 2 isofrom 14

    Status: VALIDATED

    Source sequence(s)
    AL672032, AL691477
  14. NM_145284.5NP_660327.2  PABIR family member 2 isoform 1

    See identical proteins and their annotated locations for NP_660327.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes isoform 1.
    Source sequence(s)
    AK292517, BC019221, BX538218
    Consensus CDS
    CCDS14643.1
    UniProtKB/Swiss-Prot
    Q7Z309
    Related
    ENSP00000419592.1, ENST00000486347.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    134769566..134797217 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011531292.2XP_011529594.1  PABIR family member 2 isoform X10

    See identical proteins and their annotated locations for XP_011529594.1

  2. XM_011531283.2XP_011529585.1  PABIR family member 2 isoform X2

    See identical proteins and their annotated locations for XP_011529585.1

  3. XM_011531282.2XP_011529584.1  PABIR family member 2 isoform X1

    See identical proteins and their annotated locations for XP_011529584.1

  4. XM_011531284.2XP_011529586.1  PABIR family member 2 isoform X3

    See identical proteins and their annotated locations for XP_011529586.1

  5. XM_011531290.2XP_011529592.1  PABIR family member 2 isoform X7

    See identical proteins and their annotated locations for XP_011529592.1

  6. XM_011531288.2XP_011529590.1  PABIR family member 2 isoform X6

    See identical proteins and their annotated locations for XP_011529590.1

  7. XM_011531286.2XP_011529588.1  PABIR family member 2 isoform X5

    See identical proteins and their annotated locations for XP_011529588.1

  8. XM_011531285.2XP_011529587.1  PABIR family member 2 isoform X4

    See identical proteins and their annotated locations for XP_011529587.1

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