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FAM201A family with sequence similarity 201 member A [ Homo sapiens (human) ]

Gene ID: 158228, updated on 12-Oct-2019

Summary

Official Symbol
FAM201Aprovided by HGNC
Official Full Name
family with sequence similarity 201 member Aprovided by HGNC
Primary source
HGNC:HGNC:27239
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C9orf122
Expression
Broad expression in bone marrow (RPKM 5.5), thyroid (RPKM 1.9) and 16 other tissues See more

Genomic context

See FAM201A in Genome Data Viewer
Location:
9p13.1
Exon count:
2
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (38621088..38623284)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (38621085..38623281)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 4 subfamily F member 33, pseudogene Neighboring gene family with sequence similarity 95 member C Neighboring gene ankyrin repeat domain 18A Neighboring gene sorting nexin 18 pseudogene 3 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta pseudogene 1 Neighboring gene RNA, U6 small nuclear 765, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

NHGRI GWAS Catalog

Description
Cross-Disorder Genome-Wide Analyses Suggest a Complex Genetic Relationship Between Tourette's Syndrome and OCD.
NHGRI GWA Catalog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027294.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AL591543, BC036230, BC041970

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    38621088..38623284
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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