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C9orf163 chromosome 9 putative open reading frame 163 [ Homo sapiens (human) ]

Gene ID: 158055, updated on 13-May-2022

Summary

Official Symbol
C9orf163provided by HGNC
Official Full Name
chromosome 9 putative open reading frame 163provided by HGNC
Primary source
HGNC:HGNC:26718
See related
Ensembl:ENSG00000196366 AllianceGenome:HGNC:26718
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Annotation information
Note: This locus is considered non-coding by other groups due to a lack of experimental support for the protein, but NCBI annotates the protein because it meets minimal RefSeq quality criteria for representation. The coding status remains uncertain. [29 Oct 2014]
Orthologs
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Genomic context

See C9orf163 in Genome Data Viewer
Location:
9q34.3
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (136483495..136486067)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (148712600..148715172)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (139377947..139380519)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene peptidase, mitochondrial processing subunit alpha Neighboring gene inositol polyphosphate-5-phosphatase E Neighboring gene SEC16 homolog A, endoplasmic reticulum export factor Neighboring gene notch receptor 1 Neighboring gene uncharacterized LOC124902310 Neighboring gene microRNA 4673 Neighboring gene Sharpr-MPRA regulatory region 6589

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Other Names

  • uncharacterized protein C9orf163

Clone Names

  • FLJ36779

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_172629.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL592301
    Related
    ENST00000624034.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    136483495..136486067
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    148712600..148715172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_152571.3: Suppressed sequence

    Description
    NM_152571.3: This RefSeq was removed because currently there is support for the transcript but not for the protein.