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MIR124-1HG MIR124-1 host gene [ Homo sapiens (human) ]

Gene ID: 157627, updated on 13-May-2022

Summary

Official Symbol
MIR124-1HGprovided by HGNC
Official Full Name
MIR124-1 host geneprovided by HGNC
Primary source
HGNC:HGNC:27231
See related
Ensembl:ENSG00000253230 AllianceGenome:HGNC:27231
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Rncr3; neuroLNC; LINC00599
Summary
Predicted to act upstream of or within several processes, including gene silencing by miRNA; long-term synaptic potentiation; and sensory perception of sound. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward brain (RPKM 17.1) See more
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Genomic context

See MIR124-1HG in Genome Data Viewer
Location:
8p23.1
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (9900064..9903329, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (9837629..9840894)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (9757574..9760839, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC124902056 Neighboring gene uncharacterized LOC124902057 Neighboring gene microRNA 124-1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • long intergenic non-protein coding RNA 599
  • neuron-specific nuclear lncRNA
  • retinal non-coding RNA 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024281.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AF052108, AL832535, BC042097, CN430287, DA113430, DA155571
    Related
    ENST00000667251.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    9900064..9903329 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_018654717.1 Reference GRCh38.p14 PATCHES

    Range
    3445395..3448660
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    9837629..9840894
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)