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SDAD1P1 SDA1 domain containing 1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 157489, updated on 17-Jun-2024

Summary

Official Symbol
SDAD1P1provided by HGNC
Official Full Name
SDA1 domain containing 1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:31403
See related
Ensembl:ENSG00000293314 AllianceGenome:HGNC:31403
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See SDAD1P1 in Genome Data Viewer
Location:
8p21.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (26379259..26382953, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (26655819..26659513, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (26236775..26240469, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene matrix metallopeptidase 12 (macrophage elastase) pseudogene Neighboring gene Sharpr-MPRA regulatory region 858 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19038 Neighboring gene protein phosphatase 2 regulatory subunit Balpha Neighboring gene Sharpr-MPRA regulatory region 13890 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:26192157-26192656 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:26239047-26240246 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27126 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19039 Neighboring gene Sharpr-MPRA regulatory region 12075 Neighboring gene GATA motif-containing MPRA enhancer 260 Neighboring gene BCL2 interacting protein 3 like Neighboring gene Sharpr-MPRA regulatory region 1267 Neighboring gene DNAJB6 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_144550.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC022911, AW025729
    Related
    ENST00000519902.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    26379259..26382953 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    26655819..26659513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)