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LINC00689 long intergenic non-protein coding RNA 689 [ Homo sapiens (human) ]

Gene ID: 154822, updated on 7-Jan-2023

Summary

Official Symbol
LINC00689provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 689provided by HGNC
Primary source
HGNC:HGNC:27217
See related
Ensembl:ENSG00000231419 AllianceGenome:HGNC:27217
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
STORM
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC00689 in Genome Data Viewer
Location:
7q36.3
Exon count:
5
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (159008354..159026238)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (160234066..160252596)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (158801045..158818929)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901794 Neighboring gene uncharacterized LOC124901795 Neighboring gene LINC00689 intron CAGE-defined high expression enhancer Neighboring gene Sharpr-MPRA regulatory region 8832 Neighboring gene vasoactive intestinal peptide receptor 2 Neighboring gene VISTA enhancer hs1753

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • Stress- and TNF-alpha-activated ORF Micropeptide

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024394.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004863, BC042556
    Related
    ENST00000438049.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    159008354..159026238
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    160234066..160252596
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_198345.1: Suppressed sequence

    Description
    NM_198345.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.