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CFAP206 cilia and flagella associated protein 206 [ Homo sapiens (human) ]

Gene ID: 154313, updated on 7-Jun-2020

Summary

Official Symbol
CFAP206provided by HGNC
Official Full Name
cilia and flagella associated protein 206provided by HGNC
Primary source
HGNC:HGNC:21405
See related
Ensembl:ENSG00000272514
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C6orf165; dJ382I10.1
Expression
Restricted expression toward testis (RPKM 41.8) See more
Orthologs

Genomic context

See CFAP206 in Genome Data Viewer
Location:
6q15
Exon count:
13
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 6 NC_000006.12 (87407972..87464465)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (88117690..88174191)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene chromosome 6 open reading frame 163 Neighboring gene long intergenic non-protein coding RNA 1590 Neighboring gene adenosylmethionine decarboxylase 1 pseudogene Neighboring gene TATA-box binding protein associated factor 13 pseudogene 1 Neighboring gene ST13, Hsp70 interacting protein pseudogene 16 Neighboring gene solute carrier family 35 member A1 Neighboring gene RNA, U6 small nuclear 444, pseudogene Neighboring gene arginyl-tRNA synthetase 2, mitochondrial

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ25974, FLJ46091

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
axoneme assembly ISS
Inferred from Sequence or Structural Similarity
more info
 
cilium movement ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
colocalizes_with A axonemal microtubule ISS
Inferred from Sequence or Structural Similarity
more info
 
motile cilium ISS
Inferred from Sequence or Structural Similarity
more info
 
radial spoke ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
cilia- and flagella-associated protein 206
Names
UPF0704 protein C6orf165

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031743.3NP_001026913.1  cilia- and flagella-associated protein 206

    See identical proteins and their annotated locations for NP_001026913.1

    Status: VALIDATED

    Source sequence(s)
    AL049697
    Consensus CDS
    CCDS34498.1
    UniProtKB/Swiss-Prot
    Q8IYR0
    UniProtKB/TrEMBL
    Q8N771
    Related
    ENSP00000358575.4, ENST00000369562.9
    Conserved Domains (1) summary
    pfam12018
    Location:218490
    DUF3508; Domain of unknown function (DUF3508)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p13 Primary Assembly

    Range
    87407972..87464465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_178823.2: Suppressed sequence

    Description
    NM_178823.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
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