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C4orf45 chromosome 4 open reading frame 45 [ Homo sapiens (human) ]

Gene ID: 152940, updated on 23-Nov-2021

Summary

Official Symbol
C4orf45provided by HGNC
Official Full Name
chromosome 4 open reading frame 45provided by HGNC
Primary source
HGNC:HGNC:26342
See related
Ensembl:ENSG00000164123
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 3.4) See more
Orthologs
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Genomic context

See C4orf45 in Genome Data Viewer
Location:
4q32.1
Exon count:
10
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (158893134..159082883, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (159814286..159956381, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene electron transfer flavoprotein dehydrogenase Neighboring gene peptidylprolyl isomerase D Neighboring gene RNA, U6 small nuclear 128, pseudogene Neighboring gene folliculin interacting protein 2 Neighboring gene proteasome activator subunit 2 pseudogene 3 Neighboring gene fatty acid binding protein 5 pseudogene 12 Neighboring gene Rap guanine nucleotide exchange factor 2 Neighboring gene microRNA 3688-1 Neighboring gene microRNA 3688-2 Neighboring gene Sharpr-MPRA regulatory region 9369

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ25371

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
uncharacterized protein C4orf45

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_152543.3NP_689756.2  uncharacterized protein C4orf45

    See identical proteins and their annotated locations for NP_689756.2

    Status: VALIDATED

    Source sequence(s)
    AC093700, AC109823, BP369394, DB037602
    Consensus CDS
    CCDS47156.1
    UniProtKB/Swiss-Prot
    Q96LM5
    Related
    ENSP00000412215.2, ENST00000434826.3
    Conserved Domains (1) summary
    pfam15123
    Location:22133
    DUF4562; Domain of unknown function (DUF4562)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    158893134..159082883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011531671.2XP_011529973.1  uncharacterized protein C4orf45 isoform X2

    See identical proteins and their annotated locations for XP_011529973.1

    Conserved Domains (1) summary
    pfam15123
    Location:15126
    DUF4562; Domain of unknown function (DUF4562)
  2. XM_017007809.1XP_016863298.1  uncharacterized protein C4orf45 isoform X1

    UniProtKB/Swiss-Prot
    Q96LM5
    Conserved Domains (1) summary
    pfam15123
    Location:22133
    DUF4562; Domain of unknown function (DUF4562)
  3. XM_017007808.1XP_016863297.1  uncharacterized protein C4orf45 isoform X1

    UniProtKB/Swiss-Prot
    Q96LM5
    Conserved Domains (1) summary
    pfam15123
    Location:22133
    DUF4562; Domain of unknown function (DUF4562)
  4. XM_011531672.3XP_011529974.1  uncharacterized protein C4orf45 isoform X2

    See identical proteins and their annotated locations for XP_011529974.1

    Conserved Domains (1) summary
    pfam15123
    Location:15126
    DUF4562; Domain of unknown function (DUF4562)
  5. XM_017007810.1XP_016863299.1  uncharacterized protein C4orf45 isoform X1

    UniProtKB/Swiss-Prot
    Q96LM5
    Conserved Domains (1) summary
    pfam15123
    Location:22133
    DUF4562; Domain of unknown function (DUF4562)
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