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MSL3P1 MSL complex subunit 3 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 151507, updated on 5-Jan-2022

Summary

Official Symbol
MSL3P1provided by HGNC
Official Full Name
MSL complex subunit 3 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:17837
See related
Ensembl:ENSG00000224287
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MSL3L2
Summary
Predicted to be involved in heterochromatin assembly and histone modification. Predicted to be part of MSL complex and NuA4 histone acetyltransferase complex. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Biased expression in testis (RPKM 23.6), prostate (RPKM 2.5) and 10 other tissues See more
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Genomic context

See MSL3P1 in Genome Data Viewer
Location:
2q37.1
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (233865437..233868409, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (234774083..234777055, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene maestro heat like repeat family member 2A Neighboring gene Holliday junction recognition protein Neighboring gene transient receptor potential cation channel subfamily M member 8 Neighboring gene Sharpr-MPRA regulatory region 14260 Neighboring gene Sharpr-MPRA regulatory region 7512

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • MSL3-like 2
  • male-specific lethal 3 homolog pseudogene 1
  • male-specific lethal 3-like 2
  • male-specific lethal-3 homolog 2
  • putative male-specific lethal-3 protein-like 2

Clone Names

  • FLJ79271

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in histone H2A acetylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in histone H4 acetylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in histone H4-K16 acetylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in histone acetylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in histone deacetylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of MSL complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of NuA4 histone acetyltransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of histone acetyltransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024322.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA806373, AK301707, AW371403, DB457661, DC394932
    Related
    ENST00000438684.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    233865437..233868409 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001166217.1: Suppressed sequence

    Description
    NM_001166217.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
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