Format

Send to:

Choose Destination

ARL6IP6 ADP ribosylation factor like GTPase 6 interacting protein 6 [ Homo sapiens (human) ]

Gene ID: 151188, updated on 3-May-2020

Summary

Official Symbol
ARL6IP6provided by HGNC
Official Full Name
ADP ribosylation factor like GTPase 6 interacting protein 6provided by HGNC
Primary source
HGNC:HGNC:24048
See related
Ensembl:ENSG00000177917 MIM:616495
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AIP6; AIP-6; PFAAP1
Expression
Ubiquitous expression in placenta (RPKM 7.1), bone marrow (RPKM 6.2) and 25 other tissues See more
Orthologs

Genomic context

See ARL6IP6 in Genome Data Viewer
Location:
2q23.3
Exon count:
11
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (152717648..152762396)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (153574407..153617767)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene formin like 2 Neighboring gene Sharpr-MPRA regulatory region 2662 Neighboring gene uncharacterized LOC105373690 Neighboring gene pre-mRNA processing factor 40 homolog A Neighboring gene ubiquilin 4 pseudogene 2 Neighboring gene uncharacterized LOC105373691

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC33864

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
nuclear inner membrane ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
ADP-ribosylation factor-like protein 6-interacting protein 6
Names
ADP-ribosylation factor GTPase 6 interacting protein 6
ADP-ribosylation factor-like 6 interacting protein 6
ADP-ribosylation-like factor 6 interacting protein 6
ARL-6-interacting protein 6
phosphonoformate immuno-associated protein 1
regulated by phosphonoformate

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_053091.1 RefSeqGene

    Range
    5928..49693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001350068.2NP_001336997.1  ADP-ribosylation factor-like protein 6-interacting protein 6 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC079344
    Conserved Domains (1) summary
    pfam15062
    Location:42118
    ARL6IP6; Haemopoietic lineage transmembrane helix
  2. NM_001371972.1NP_001358901.1  ADP-ribosylation factor-like protein 6-interacting protein 6 isoform c

    Status: VALIDATED

    Source sequence(s)
    AC079344
  3. NM_152522.7NP_689735.1  ADP-ribosylation factor-like protein 6-interacting protein 6 isoform a

    See identical proteins and their annotated locations for NP_689735.1

    Status: VALIDATED

    Source sequence(s)
    AC079344
    Consensus CDS
    CCDS2197.1
    UniProtKB/Swiss-Prot
    Q8N6S5
    UniProtKB/TrEMBL
    B3KMZ5
    Related
    ENSP00000315357.4, ENST00000326446.9
    Conserved Domains (1) summary
    pfam15062
    Location:138214
    ARL6IP6; Haemopoietic lineage transmembrane helix

RNA

  1. NR_024526.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079344
  2. NR_146422.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079344
  3. NR_146423.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079344
  4. NR_146424.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079344
  5. NR_146425.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079344
  6. NR_146426.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079344
  7. NR_146427.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079344
  8. NR_146428.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079344
  9. NR_146429.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079344
  10. NR_146430.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079344
  11. NR_146431.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079344

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    152717648..152762396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center