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LINC01106 long intergenic non-protein coding RNA 1106 [ Homo sapiens (human) ]

Gene ID: 151009, updated on 13-May-2022

Summary

Official Symbol
LINC01106provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1106provided by HGNC
Primary source
HGNC:HGNC:26769
See related
AllianceGenome:HGNC:26769
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in brain (RPKM 31.9), small intestine (RPKM 18.0) and 17 other tissues See more
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Genomic context

See LINC01106 in Genome Data Viewer
Location:
2q13
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (110375109..110384536, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (110797583..110807007, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (111132686..111142113, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375809 Neighboring gene zinc finger protein 532 pseudogene Neighboring gene LIM zinc finger domain containing 4 Neighboring gene zinc finger and BTB domain containing 45 pseudogene 2 Neighboring gene glycosylphosphatidylinositol anchor attachment 1 pseudogene 2 Neighboring gene glycosylphosphatidylinositol anchor attachment protein 1 homolog (yeast) pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Clone Names

  • FLJ38359, AC112229.7, DKFZp686K04236

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027244.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC112229, AI699847, BP341570, DB205082

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    110375109..110384536 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    110797583..110807007 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_152518.1: Suppressed sequence

    Description
    NM_152518.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.