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PTMAP5 prothymosin alpha pseudogene 5 [ Homo sapiens (human) ]

Gene ID: 150928, updated on 16-Jan-2024

Summary

Official Symbol
PTMAP5provided by HGNC
Official Full Name
prothymosin alpha pseudogene 5provided by HGNC
Primary source
HGNC:HGNC:9628
See related
Ensembl:ENSG00000293057 AllianceGenome:HGNC:9628
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

Location:
13q31.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (81689896..81691080)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (80920214..80921398)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (82264031..82265215)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370282 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:81936645-81937145 Neighboring gene uncharacterized LOC105370283 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_33503 Neighboring gene uncharacterized LOC105370284 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:82448600-82449287 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:82449288-82449974 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:82463211-82463711 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:82560263-82560797 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:82561371-82561942 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:82561943-82562513 Neighboring gene uncharacterized LOC105370285

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_004798.3 

    Range
    101..1285
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    81689896..81691080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    80920214..80921398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)