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C2orf15 chromosome 2 open reading frame 15 [ Homo sapiens (human) ]

Gene ID: 150590, updated on 23-Nov-2021

Summary

Official Symbol
C2orf15provided by HGNC
Official Full Name
chromosome 2 open reading frame 15provided by HGNC
Primary source
HGNC:HGNC:28436
See related
Ensembl:ENSG00000273045
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in thyroid (RPKM 3.3), kidney (RPKM 2.5) and 23 other tissues See more
Orthologs
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Genomic context

See C2orf15 in Genome Data Viewer
Location:
2q11.2
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (99141707..99151669)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (99758170..99768132)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene CRACD like Neighboring gene Sharpr-MPRA regulatory region 6151 Neighboring gene testis specific 10 Neighboring gene SMC3 pseudogene 1 Neighboring gene lipoyltransferase 1 Neighboring gene microtubule interacting and trafficking domain containing 1 Neighboring gene mitochondrial ribosomal protein L30

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

Associated conditions

Description Tests
Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4.
GeneReviews: Not available

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
uncharacterized protein C2orf15

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001317992.2NP_001304921.2  uncharacterized protein C2orf15

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    AC092587
    Consensus CDS
    CCDS2038.1
    Related
    ENSP00000386654.2, ENST00000409684.2
    Conserved Domains (1) summary
    pfam17701
    Location:191
    DUF5547; Family of unknown function (DUF5547)
  2. NM_144706.4NP_653307.2  uncharacterized protein C2orf15

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate exon in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    AC092587, BC021264
    Consensus CDS
    CCDS2038.1
    Related
    ENSP00000497775.2, ENST00000650052.2
    Conserved Domains (1) summary
    pfam17701
    Location:191
    DUF5547; Family of unknown function (DUF5547)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    99141707..99151669
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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