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PRSS40A serine protease 40A (pseudogene) [ Homo sapiens (human) ]

Gene ID: 150527, updated on 25-Oct-2022

Summary

Official Symbol
PRSS40Aprovided by HGNC
Official Full Name
serine protease 40A (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:37319
See related
Ensembl:ENSG00000290614 AllianceGenome:HGNC:37319
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TISP43
Expression
Restricted expression toward testis (RPKM 2.3) See more
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Genomic context

See PRSS40A in Genome Data Viewer
Location:
2q21.1
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (130570846..130584161)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (130970470..130983782, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (131328419..131341734)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene cripto, FRL-1, cryptic family 1B Neighboring gene serine protease 40B (pseudogene) Neighboring gene cripto, FRL-1, cryptic family 1 Neighboring gene POTE ankyrin domain family member J Neighboring gene RNA, U6 small nuclear 848, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027313.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    BC064385
    Related
    ENST00000419965.1
  2. NR_027314.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate exon, compared to variant 1
    Source sequence(s)
    BC037249, BC064385

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    130570846..130584161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    130970470..130983782 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)