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ANKRD30BP2 ankyrin repeat domain 30B pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 149992, updated on 13-May-2022

Summary

Official Symbol
ANKRD30BP2provided by HGNC
Official Full Name
ankyrin repeat domain 30B pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:16620
See related
AllianceGenome:HGNC:16620
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CT85; CTSP1; CTSP-1; C21orf99
Annotation information
Annotation category: suggests misassembly
Expression
Restricted expression toward testis (RPKM 2.6) See more
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Genomic context

See ANKRD30BP2 in Genome Data Viewer
Location:
21q11.2
Exon count:
12
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (13038166..13118251)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (11382461..11462603)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (14410487..14490572)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 15 pseudogene 4 Neighboring gene immunoglobulin heavy variable 1/OR21-1 (non-functional) Neighboring gene RNA, U6 small nuclear 614, pseudogene Neighboring gene vomeronasal 1 receptor 109 pseudogene Neighboring gene zinc finger protein 355, pseudogene Neighboring gene ankyrin repeat domain 30B pseudogene 1 Neighboring gene microRNA 3156-3 Neighboring gene fibroblast growth factor 7 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • ankyrin repeat domain 30A pseudogene
  • cancer-testis SP-1
  • cancer/testis antigen 85

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026916.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AF427490, AP001464, BC036510, DQ179138, DQ179139, DQ179141

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    13038166..13118251
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060945.1 Alternate T2T-CHM13v2.0

    Range
    11382461..11462603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_153773.1: Suppressed sequence

    Description
    NM_153773.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.