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SRARP steroid receptor associated and regulated protein [ Homo sapiens (human) ]

Gene ID: 149563, updated on 22-Jul-2021

Summary

Official Symbol
SRARPprovided by HGNC
Official Full Name
steroid receptor associated and regulated proteinprovided by HGNC
Primary source
HGNC:HGNC:28339
See related
Ensembl:ENSG00000183888 MIM:619448
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ERRF; C1orf64
Expression
Biased expression in endometrium (RPKM 2.9), salivary gland (RPKM 2.4) and 4 other tissues See more
Orthologs
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Genomic context

See SRARP in Genome Data Viewer
Location:
1p36.13
Exon count:
2
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (16004236..16008807)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (16330731..16335302)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene spen family transcriptional repressor Neighboring gene NFE2L2 motif-containing MPRA enhancer 216 Neighboring gene zinc finger and BTB domain containing 17 Neighboring gene CLCNKA recombination region Neighboring gene heat shock protein family B (small) member 7 Neighboring gene chloride voltage-gated channel Ka

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC24047

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables estrogen receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables estrogen receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
steroid receptor-associated and regulated protein
Names
ER-related factor
steroid receptor-regulated protein
uncharacterized protein C1orf64

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_178840.4NP_849162.1  steroid receptor-associated and regulated protein

    See identical proteins and their annotated locations for NP_849162.1

    Status: VALIDATED

    Source sequence(s)
    AI732325, AL355994, AW299952, DA387602
    Consensus CDS
    CCDS166.1
    UniProtKB/Swiss-Prot
    Q8NEQ6
    Related
    ENSP00000332162.2, ENST00000329454.2
    Conserved Domains (1) summary
    pfam15547
    Location:34169
    DUF4654; Domain of unknown function (DUF4654)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    16004236..16008807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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