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CCDC24 coiled-coil domain containing 24 [ Homo sapiens (human) ]

Gene ID: 149473, updated on 4-Jun-2017
Official Symbol
CCDC24provided by HGNC
Official Full Name
coiled-coil domain containing 24provided by HGNC
Primary source
HGNC:HGNC:28688
See related
Ensembl:ENSG00000159214 Vega:OTTHUMG00000008299
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
Location:
1p34.1
Exon count:
11
Annotation release Status Assembly Chr Location
108 current GRCh38.p7 (GCF_000001405.33) 1 NC_000001.11 (43991247..43996528)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (44457280..44462200)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting V0 subunit b Neighboring gene beta-1,4-galactosyltransferase 2 Neighboring gene solute carrier family 6 member 9 Neighboring gene uncharacterized LOC107984948 Neighboring gene uncharacterized LOC107984949 Neighboring gene Kruppel like factor 17

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • MGC45441

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Preferred Names
coiled-coil domain-containing protein 24

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001349127.1NP_001336056.1  coiled-coil domain-containing protein 24 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL139220
  2. NM_001349128.1NP_001336057.1  coiled-coil domain-containing protein 24 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AL139220
  3. NM_001349129.1NP_001336058.1  coiled-coil domain-containing protein 24 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AL139220
  4. NM_152499.3NP_689712.1  coiled-coil domain-containing protein 24 isoform 1

    See identical proteins and their annotated locations for NP_689712.1

    Status: VALIDATED

    Source sequence(s)
    AL139220, BC033868
    Consensus CDS
    CCDS507.1
    UniProtKB/Swiss-Prot
    Q8N4L8
    Related
    ENSP00000361392.3, OTTHUMP00000010013, ENST00000372318.7, OTTHUMT00000022865
    Conserved Domains (1) summary
    pfam15669
    Location:21206
    CCDC24; Coiled-coil domain-containing protein 24 family

RNA

  1. NR_146064.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) differs at the 5' end and lacks two internal exons compared to variant 1. This variant is represented as non-coding because use of the start codon used in variant renders the transcript a candidate for nonsense-mediated decay (NMD).
    Source sequence(s)
    AL139220, BU164878, HY096272

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p7 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p7 Primary Assembly

    Range
    43991247..43996528
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017000424.1XP_016855913.1  coiled-coil domain-containing protein 24 isoform X1

  2. XM_017000432.1XP_016855921.1  coiled-coil domain-containing protein 24 isoform X9

  3. XM_017000434.1XP_016855923.1  coiled-coil domain-containing protein 24 isoform X11

  4. XM_017000425.1XP_016855914.1  coiled-coil domain-containing protein 24 isoform X2

  5. XM_017000423.1XP_016855912.1  coiled-coil domain-containing protein 24 isoform X1

  6. XM_017000427.1XP_016855916.1  coiled-coil domain-containing protein 24 isoform X4

  7. XM_017000430.1XP_016855919.1  coiled-coil domain-containing protein 24 isoform X7

  8. XM_017000428.1XP_016855917.1  coiled-coil domain-containing protein 24 isoform X5

  9. XM_017000436.1XP_016855925.1  coiled-coil domain-containing protein 24 isoform X13

  10. XM_017000435.1XP_016855924.1  coiled-coil domain-containing protein 24 isoform X12

  11. XM_017000426.1XP_016855915.1  coiled-coil domain-containing protein 24 isoform X3

  12. XM_017000437.1XP_016855926.1  coiled-coil domain-containing protein 24 isoform X14

  13. XM_017000439.1XP_016855928.1  coiled-coil domain-containing protein 24 isoform X16

  14. XM_017000429.1XP_016855918.1  coiled-coil domain-containing protein 24 isoform X6

  15. XM_017000431.1XP_016855920.1  coiled-coil domain-containing protein 24 isoform X8

  16. XM_017000433.1XP_016855922.1  coiled-coil domain-containing protein 24 isoform X10

  17. XM_017000438.1XP_016855927.1  coiled-coil domain-containing protein 24 isoform X15

  18. XM_017000441.1XP_016855930.1  coiled-coil domain-containing protein 24 isoform X18

    UniProtKB/Swiss-Prot
    Q8N4L8
  19. XM_017000440.1XP_016855929.1  coiled-coil domain-containing protein 24 isoform X17

  20. XM_017000442.1XP_016855931.1  coiled-coil domain-containing protein 24 isoform X19

  21. XM_017000443.1XP_016855932.1  coiled-coil domain-containing protein 24 isoform X20

  22. XM_017000444.1XP_016855933.1  coiled-coil domain-containing protein 24 isoform X21

  23. XM_017000446.1XP_016855935.1  coiled-coil domain-containing protein 24 isoform X23

  24. XM_017000445.1XP_016855934.1  coiled-coil domain-containing protein 24 isoform X22

RNA

  1. XR_001736995.1 RNA Sequence

Alternate CHM1_1.1

Genomic

  1. NC_018912.2 Alternate CHM1_1.1

    Range
    44573446..44578367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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