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FAM163A family with sequence similarity 163 member A [ Homo sapiens (human) ]

Gene ID: 148753, updated on 18-Aug-2020

Summary

Official Symbol
FAM163Aprovided by HGNC
Official Full Name
family with sequence similarity 163 member Aprovided by HGNC
Primary source
HGNC:HGNC:28274
See related
Ensembl:ENSG00000143340 Ensembl:ENSG00000243062 MIM:611727
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NDSP; C1orf76
Expression
Biased expression in testis (RPKM 5.6), adrenal (RPKM 3.7) and 9 other tissues See more
Orthologs

Genomic context

See FAM163A in Genome Data Viewer
Location:
1q25.2
Exon count:
14
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (179727763..179816198)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (179696912..179785333)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 pseudogene Neighboring gene tudor domain containing 5 Neighboring gene uncharacterized LOC105371635 Neighboring gene uncharacterized LOC105371634 Neighboring gene microRNA 12116 Neighboring gene long intergenic non-protein coding RNA 2818 Neighboring gene torsin 1A interacting protein 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC16664

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein FAM163A
Names
cebelin
neuroblastoma derived secretory protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001329712.2NP_001316641.1  protein FAM163A

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript. Variants 1-9 all encode the same protein.
    Source sequence(s)
    BC009382, DB139576
    Consensus CDS
    CCDS1333.1
    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  2. NM_001329713.2NP_001316642.1  protein FAM163A

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) encodes the same protein as variants 1, 2, and 4-9.
    Source sequence(s)
    AK292432, AL359853, BC009382, DB066264
    Consensus CDS
    CCDS1333.1
    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  3. NM_001329714.2NP_001316643.1  protein FAM163A

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) encodes the same protein as variants 1-3 and 5-9.
    Source sequence(s)
    BC009382, DB066264, DB089377
    Consensus CDS
    CCDS1333.1
    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  4. NM_001329715.2NP_001316644.1  protein FAM163A

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) encodes the same protein as variants 1-4 and 6-9.
    Source sequence(s)
    AL359853, BC009382, DB091482, HY036705
    Consensus CDS
    CCDS1333.1
    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  5. NM_001329716.2NP_001316645.1  protein FAM163A

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6) encodes the same protein as variants 1-5 and 7-9.
    Source sequence(s)
    AL359853, BC009382, DB091482, HY036705
    Consensus CDS
    CCDS1333.1
    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  6. NM_001329717.2NP_001316646.1  protein FAM163A

    Status: VALIDATED

    Description
    Transcript Variant: This variant (7) encodes the same protein as variants 1-6, 8, and 9.
    Source sequence(s)
    BC009382, DA416655
    Consensus CDS
    CCDS1333.1
    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  7. NM_001329718.2NP_001316647.1  protein FAM163A

    Status: VALIDATED

    Description
    Transcript Variant: This variant (8) encodes the same protein as variants 1-7 and 9.
    Source sequence(s)
    AK310711, AL359853, BC009382
    Consensus CDS
    CCDS1333.1
    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  8. NM_001329719.2NP_001316648.1  protein FAM163A

    Status: VALIDATED

    Description
    Transcript Variant: This variant (9) encodes the same protein as variants 1-8.
    Source sequence(s)
    AL359853, BC009382, DA402650
    Consensus CDS
    CCDS1333.1
    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  9. NM_173509.3NP_775780.1  protein FAM163A

    See identical proteins and their annotated locations for NP_775780.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) encodes the same protein as variants 1 and 3-9.
    Source sequence(s)
    BC009382
    Consensus CDS
    CCDS1333.1
    UniProtKB/Swiss-Prot
    Q96GL9
    Related
    ENSP00000354891.4, ENST00000341785.4
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family

RNA

  1. NR_138086.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359853
    Related
    ENST00000451471.1
  2. NR_138087.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    DB092551, DB151643
  3. NR_138088.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    DB061956, DB066264, DB151643
  4. NR_138089.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC009382, DB151643
  5. NR_138090.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359853
    Related
    ENST00000669730.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    179727763..179816198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006711177.1XP_006711240.1  protein FAM163A isoform X1

    See identical proteins and their annotated locations for XP_006711240.1

    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  2. XM_017000393.1XP_016855882.1  protein FAM163A isoform X1

    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  3. XM_017000389.1XP_016855878.1  protein FAM163A isoform X1

    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  4. XM_017000387.1XP_016855876.1  protein FAM163A isoform X1

    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  5. XM_017000386.1XP_016855875.1  protein FAM163A isoform X1

    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  6. XM_017000391.1XP_016855880.1  protein FAM163A isoform X1

    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  7. XM_024453399.1XP_024309167.1  protein FAM163A isoform X1

    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  8. XM_017000390.1XP_016855879.1  protein FAM163A isoform X1

    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  9. XM_017000388.1XP_016855877.1  protein FAM163A isoform X1

    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  10. XM_006711174.2XP_006711237.1  protein FAM163A isoform X1

    See identical proteins and their annotated locations for XP_006711237.1

    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  11. XM_006711175.2XP_006711238.1  protein FAM163A isoform X1

    See identical proteins and their annotated locations for XP_006711238.1

    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  12. XM_011509217.1XP_011507519.1  protein FAM163A isoform X1

    See identical proteins and their annotated locations for XP_011507519.1

    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
  13. XM_017000392.1XP_016855881.1  protein FAM163A isoform X1

    UniProtKB/Swiss-Prot
    Q96GL9
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family
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