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ZNF714 zinc finger protein 714 [ Homo sapiens (human) ]

Gene ID: 148206, updated on 1-Jun-2020

Summary

Official Symbol
ZNF714provided by HGNC
Official Full Name
zinc finger protein 714provided by HGNC
Primary source
HGNC:HGNC:27124
See related
Ensembl:ENSG00000160352
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in thyroid (RPKM 4.5), ovary (RPKM 3.5) and 21 other tissues See more

Genomic context

See ZNF714 in Genome Data Viewer
Location:
19p12
Exon count:
7
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (21082147..21125094)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (21264953..21307897)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene zinc finger protein 430 Neighboring gene vomeronasal 1 receptor 80 pseudogene Neighboring gene RNA, 5S ribosomal pseudogene 469 Neighboring gene CRISPRi-validated cis-regulatory element chr19.3196 Neighboring gene vomeronasal 1 receptor 81 pseudogene Neighboring gene zinc finger protein 431 Neighboring gene ribosomal protein L7a pseudogene 10

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • FLJ33668, FLJ43674, DKFZp547O168

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
RNA polymerase II proximal promoter sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
regulation of transcription, DNA-templated IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_182515.4NP_872321.2  zinc finger protein 714

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the supported protein.
    Source sequence(s)
    AC010620, BC022527, BC050468, DB028091
    Consensus CDS
    CCDS54239.1
    UniProtKB/Swiss-Prot
    Q96N38
    UniProtKB/TrEMBL
    A0A087WU35
    Related
    ENSP00000478345.1, ENST00000456283.7
    Conserved Domains (4) summary
    smart00349
    Location:236
    KRAB; krueppel associated box
    COG5048
    Location:171504
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:399419
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:439464
    zf-H2C2_2; Zinc-finger double domain

RNA

  1. NR_117086.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site, contains an additional internal exon, and splices out part of the 3' region resulting in an alternate 3' terminal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AC010620, AC012627, BC022527, DA026469, KF573658
    Related
    ENST00000613286.4
  2. NR_117087.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) splices out part of the 3' region resulting in an alternate 3' terminal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AC010620, BC050468, DA026469
  3. NR_117088.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) contains an alternate 3' terminal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for non-stop mRNA decay (NSD).
    Source sequence(s)
    BC022527, CN341038, DA026469

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    21082147..21125094
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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