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ZNF524 zinc finger protein 524 [ Homo sapiens (human) ]

Gene ID: 147807, updated on 13-Mar-2020

Summary

Official Symbol
ZNF524provided by HGNC
Official Full Name
zinc finger protein 524provided by HGNC
Primary source
HGNC:HGNC:28322
See related
Ensembl:ENSG00000171443
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in fat (RPKM 6.3), spleen (RPKM 5.6) and 25 other tissues See more
Orthologs

Genomic context

See ZNF524 in Genome Data Viewer
Location:
19q13.42
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (55599772..55603138)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (56111730..56114504)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene zinc finger protein 579 Neighboring gene FLT3 interacting zinc finger 1 Neighboring gene uncharacterized LOC107985322 Neighboring gene zinc finger protein 865

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • MGC23143

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
DNA-binding transcription factor activity, RNA polymerase II-specific ISM
Inferred from Sequence Model
more info
PubMed 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153219.4NP_694951.1  zinc finger protein 524

    See identical proteins and their annotated locations for NP_694951.1

    Status: VALIDATED

    Source sequence(s)
    AC008735, BC014666, BC067748, HY097571
    Consensus CDS
    CCDS12929.1
    UniProtKB/Swiss-Prot
    Q96C55
    Related
    ENSP00000301073.2, ENST00000301073.4
    Conserved Domains (3) summary
    PHA00733
    Location:169221
    PHA00733; hypothetical protein
    COG5048
    Location:113177
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:144164
    ZF_C2H2; C2H2 Zn finger [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    55599772..55603138
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011526487.2XP_011524789.1  zinc finger protein 524 isoform X1

    Conserved Domains (3) summary
    COG5048
    Location:219283
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:250270
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:234259
    zf-H2C2_2; Zinc-finger double domain
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