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KRT10-AS1 KRT10 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 147184, updated on 23-Nov-2021

Summary

Official Symbol
KRT10-AS1provided by HGNC
Official Full Name
KRT10 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:28305
See related
Ensembl:ENSG00000167920
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TMEM99
Annotation information
Note: Multiple studies indicate that this gene exhibits elevated expression in various types of cancers. [20 Feb 2019]
Expression
Biased expression in skin (RPKM 53.2), testis (RPKM 22.6) and 5 other tissues See more
Orthologs
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Genomic context

See KRT10-AS1 in Genome Data Viewer
Location:
17q21.2
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (40819145..40836274)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (38975397..38992526)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371776 Neighboring gene keratin 28 Neighboring gene keratin 10 Neighboring gene uncharacterized LOC105371777 Neighboring gene Sharpr-MPRA regulatory region 3631 Neighboring gene keratin 12

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Other Names

  • transmembrane protein 99 (putative)

Clone Names

  • MGC21518

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_160886.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC090283
  2. NR_160887.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC090283
  3. NR_160888.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC090283
    Related
    ENST00000301665.8

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    40819145..40836274
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_033147.1: Suppressed sequence

    Description
    NG_033147.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
  2. NM_001195386.1: Suppressed sequence

    Description
    NM_001195386.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
  3. NM_001195387.1: Suppressed sequence

    Description
    NM_001195387.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
  4. NM_145274.3: Suppressed sequence

    Description
    NM_145274.3: This RefSeq was removed because it is now thought that this gene does not encode a protein.
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