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PCYB_121890 aspartate carbamoyltransferase [ Plasmodium cynomolgi strain B ]

Gene ID: 14693990, updated on 5-Sep-2024

Summary

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Gene symbol
PCYB_121890
Gene description
aspartate carbamoyltransferase
Locus tag
PCYB_121890
See related
PlasmoDB:PCYB_121890; VEuPathDB:PCYB_121890
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Plasmodium cynomolgi strain B (strain: B)
Lineage
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodium; Plasmodium (Plasmodium)
Orthologs
Plasmodium falciparum all
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Genomic context

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Location:
chromosome: 12
Exon count:
3
Sequence:
NC_020405.1 (395661..397310, complement)

NC_020405.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene lipoyl synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020405.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Plasmodium cynomolgi genome sequences provide insight into Plasmodium vivax and the monkey malaria clade. Tachibana S, et al. Nat Genet, 2012 Sep. PMID 22863735, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amino acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aspartate carbamoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 'de novo' pyrimidine nucleobase biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
aspartate carbamoyltransferase
XP_004223568.1
  • putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_020405.1 Reference assembly

    Range
    395661..397310 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004223520.1 → XP_004223568.1  aspartate carbamoyltransferase [Plasmodium cynomolgi strain B]

    See identical proteins and their annotated locations for XP_004223568.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K6UE27
    Conserved Domains (3) summary
    PRK00856
    Location:55 → 370
    pyrB; aspartate carbamoyltransferase catalytic subunit; Provisional
    pfam00185
    Location:213 → 370
    OTCace; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
    pfam02729
    Location:59 → 199
    OTCace_N; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
Nucleotide Protein
Heading Accession and Version

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