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PCYB_093520 spermidine synthase [ Plasmodium cynomolgi strain B ]

Gene ID: 14692921, updated on 5-Sep-2024
Gene symbol
PCYB_093520
Gene description
spermidine synthase
Locus tag
PCYB_093520
See related
PlasmoDB:PCYB_093520; VEuPathDB:PCYB_093520
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Plasmodium cynomolgi strain B (strain: B)
Lineage
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodium; Plasmodium (Plasmodium)
Orthologs
all
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See PCYB_093520 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Sequence:
NC_020402.1 (1102090..1103735)

NC_020402.1Genomic Context describing neighboring genes Neighboring gene GPI8p transamidase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene 26S proteasome regulatory complex subunit

Genomic Sequence:
NC_020402.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Plasmodium cynomolgi genome sequences provide insight into Plasmodium vivax and the monkey malaria clade. Tachibana S, et al. Nat Genet, 2012 Sep. PMID 22863735, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables spermidine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in spermidine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
Names
spermidine synthase
XP_004222514.1
  • putative

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_020402.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004222466.1 → XP_004222514.1  spermidine synthase [Plasmodium cynomolgi strain B]

    See identical proteins and their annotated locations for XP_004222514.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K6VBL2
    Conserved Domains (1) summary
    cl17173
    Location:42 → 320
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

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