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SSTR5-AS1 SSTR5 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 146336, updated on 13-May-2022

Summary

Official Symbol
SSTR5-AS1provided by HGNC
Official Full Name
SSTR5 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:26502
See related
Ensembl:ENSG00000261713 AllianceGenome:HGNC:26502
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in adrenal (RPKM 2.9), stomach (RPKM 1.1) and 8 other tissues See more
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Genomic context

See SSTR5-AS1 in Genome Data Viewer
Location:
16p13.3
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (1064081..1078731, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (1075762..1090488, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (1114081..1128731, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene SRY-box transcription factor 8 Neighboring gene Sharpr-MPRA regulatory region 13654 Neighboring gene somatostatin receptor 5 Neighboring gene C1q and TNF related 8 Neighboring gene uncharacterized LOC107984906

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • SSTR5 antisense RNA 1 (non-protein coding)

Clone Names

  • FLJ32252

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027242.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AC009041, AK056814, AW291498, BC068093
    Related
    ENST00000569832.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    1064081..1078731 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    1075762..1090488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_182510.1: Suppressed sequence

    Description
    NM_182510.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein and much of the transcript contains repetitive sequence (Alu and other repetitive sequences).