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udg type-4 uracil-DNA glycosylase [ Sulfurisphaera tokodaii str. 7 ]

Gene ID: 1460319, updated on 29-Mar-2025
Gene symbol
udg
Gene description
type-4 uracil-DNA glycosylase
Locus tag
STK_RS12375
Gene type
protein coding
Organism
Sulfurisphaera tokodaii str. 7 (strain: 7, type-material: type strain of Sulfolobus tokodaii)
Lineage
Archaea; Thermoproteota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfurisphaera
Old locus tag
ST2238; STK_22380
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Sequence:
NC_003106.2 (2245884..2246546)

NC_003106.2Genomic Context describing neighboring genes Neighboring gene metal-dependent transcriptional regulator Neighboring gene sulfite exporter TauE/SafE family protein Neighboring gene hypothetical protein Neighboring gene SDR family oxidoreductase Neighboring gene ATP-dependent nuclease Neighboring gene TIGR00304 family membrane protein Neighboring gene Glu/Leu/Phe/Val family dehydrogenase

Genomic Sequence:
NC_003106.2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Purification, crystallization and preliminary X-ray analysis of uracil-DNA glycosylase from Sulfolobus tokodaii strain 7. Kawai A, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2012 Sep 1. PMID 22949205, Free PMC Article
  2. Characterization of an archaeal family 4 uracil DNA glycosylase and its interaction with PCNA and chromatin proteins. Dionne I, et al. Biochem J, 2005 May 1. PMID 15588253, Free PMC Article
  3. Complete genome sequence of an aerobic thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain7. Kawarabayasi Y, et al. DNA Res, 2001 Aug 31. PMID 11572479

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
type-4 uracil-DNA glycosylase
WP_010980322.1

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003106.2 Reference assembly

    Range
    2245884..2246546
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010980322.1 type-4 uracil-DNA glycosylase [Sulfurisphaera tokodaii]

    See identical proteins and their annotated locations for WP_010980322.1

    UniProtKB/Swiss-Prot
    Q96YD0
    UniProtKB/TrEMBL
    A0A832TBR9
    Conserved Domains (1) summary
    cd10030
    Location:14 → 186
    UDG_F4_TTUDGA_like; Family 4 Uracil-DNA glycosylase (UDG), found exclusively in thermophilic organisms
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q96YD0.1

Gene LinkOut

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Molecular Biology Databases