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C15orf61 chromosome 15 open reading frame 61 [ Homo sapiens (human) ]

Gene ID: 145853, updated on 24-Aug-2022

Summary

Official Symbol
C15orf61provided by HGNC
Official Full Name
chromosome 15 open reading frame 61provided by HGNC
Primary source
HGNC:HGNC:34453
See related
Ensembl:ENSG00000189227 AllianceGenome:HGNC:34453
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in testis (RPKM 4.9), fat (RPKM 4.5) and 25 other tissues See more
Orthologs
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Genomic context

See C15orf61 in Genome Data Viewer
Location:
15q23
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (67521131..67530146)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (65343150..65352166)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (67813469..67822484)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene IQ motif containing H Neighboring gene IQCH antisense RNA 1 Neighboring gene Sharpr-MPRA regulatory region 13361 Neighboring gene uncharacterized LOC124903511 Neighboring gene mitogen-activated protein kinase kinase 5 Neighboring gene uncharacterized LOC124903512 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • FLJ59587

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein C15orf61

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001143936.2NP_001137408.1  uncharacterized protein C15orf61 precursor

    See identical proteins and their annotated locations for NP_001137408.1

    Status: VALIDATED

    Source sequence(s)
    AC016355, AK294012, BM664696, CK903599
    Consensus CDS
    CCDS45289.1
    UniProtKB/Swiss-Prot
    A6NNL5, B4DFB2
    Related
    ENSP00000342254.4, ENST00000342683.6
    Conserved Domains (1) summary
    pfam15031
    Location:29154
    DUF4528; Domain of unknown function (DUF4528)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    67521131..67530146
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    65343150..65352166
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)