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Gdi2 guanosine diphosphate (GDP) dissociation inhibitor 2 [ Mus musculus (house mouse) ]

Gene ID: 14569, updated on 12-May-2019

Summary

Official Symbol
Gdi2provided by MGI
Official Full Name
guanosine diphosphate (GDP) dissociation inhibitor 2provided by MGI
Primary source
MGI:MGI:99845
See related
Ensembl:ENSMUSG00000021218
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
GDIB; Gdi3; GDI-B
Expression
Ubiquitous expression in placenta adult (RPKM 83.7), CNS E11.5 (RPKM 57.6) and 28 other tissues See more
Orthologs

Genomic context

See Gdi2 in Genome Data Viewer
Location:
13; 13 A1
Exon count:
11
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 13 NC_000079.6 (3538075..3566261)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (3537321..3565507)

Chromosome 13 - NC_000079.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700024F13 gene Neighboring gene predicted gene, 40654 Neighboring gene transcription activation suppressor family member 2 Neighboring gene transcription initiation factor IIA subunit 2-like Neighboring gene ankyrin repeat and SOCS box-containing 13

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
GDP-dissociation inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
contributes_to GTPase activator activity IDA
Inferred from Direct Assay
more info
PubMed 
Rab GDP-dissociation inhibitor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Rab GDP-dissociation inhibitor activity ISO
Inferred from Sequence Orthology
more info
 
Rab GTPase binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
small GTPase binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
protein transport IEA
Inferred from Electronic Annotation
more info
 
small GTPase mediated signal transduction IPI
Inferred from Physical Interaction
more info
PubMed 
vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
Golgi apparatus IPI
Inferred from Physical Interaction
more info
PubMed 
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 
myelin sheath HDA PubMed 
synapse ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
rab GDP dissociation inhibitor beta
Names
GDI beta
GDI-2
GDI-3
RAB GDP dissociation inhibitor beta-2
guanosine diphosphate (GDP) dissociation inhibitor 3
guanosine diphosphate dissociation inhibitor 2
rab GDI beta

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008112.4NP_032138.3  rab GDP dissociation inhibitor beta

    See identical proteins and their annotated locations for NP_032138.3

    Status: VALIDATED

    Source sequence(s)
    AK083063, AK143681, AK163431, BY072982
    Consensus CDS
    CCDS36581.1
    UniProtKB/Swiss-Prot
    Q61598
    UniProtKB/TrEMBL
    Q3UPA3
    Related
    ENSMUSP00000152454.1, ENSMUST00000223396.1
    Conserved Domains (1) summary
    pfam00996
    Location:1436
    GDI; GDP dissociation inhibitor

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000079.6 Reference GRCm38.p4 C57BL/6J

    Range
    3538075..3566261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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