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ARMH4 armadillo like helical domain containing 4 [ Homo sapiens (human) ]

Gene ID: 145407, updated on 1-Aug-2020

Summary

Official Symbol
ARMH4provided by HGNC
Official Full Name
armadillo like helical domain containing 4provided by HGNC
Primary source
HGNC:HGNC:19846
See related
Ensembl:ENSG00000139971
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
UT2; C14orf37; c14_5376
Expression
Broad expression in kidney (RPKM 5.3), brain (RPKM 4.3) and 15 other tissues See more
Orthologs

Genomic context

See ARMH4 in Genome Data Viewer
Location:
14q23.1
Exon count:
12
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (57993536..58152305, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (58470808..58618847, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member F4 Neighboring gene serine and arginine rich splicing factor 10 pseudogene Neighboring gene RN7SK pseudogene 99 Neighboring gene polycomb group ring finger 3 pseudogene Neighboring gene ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 3 Neighboring gene RNA, 7SL, cytoplasmic 598, pseudogene Neighboring gene actin related protein 10

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
armadillo-like helical domain-containing protein 4
Names
uncharacterized protein C14orf37
upstream of mTORC2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001872.4NP_001001872.2  armadillo-like helical domain-containing protein 4 isoform 1 precursor

    See identical proteins and their annotated locations for NP_001001872.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longer isoform (1).
    Source sequence(s)
    AK292513, AL049838, BC013707, BC146861, BX161411
    Consensus CDS
    CCDS32089.1
    UniProtKB/Swiss-Prot
    Q86TY3
    UniProtKB/TrEMBL
    B2RUU6
    Related
    ENSP00000267485.7, ENST00000267485.7
    Conserved Domains (1) summary
    pfam15767
    Location:28604
    DUF4696; Domain of unknown function (DUF4696)
  2. NM_001320173.2NP_001307102.1  armadillo-like helical domain-containing protein 4 isoform 2 precursor

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) includes an alternate penultimate exon, compared to variant 1, resulting in a novel 3' coding region. It encodes isoform 2 which has a distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AL121579, BX161448, DA126898
    UniProtKB/Swiss-Prot
    Q86TY3
    Related
    ENST00000334342.5
    Conserved Domains (1) summary
    pfam15767
    Location:28604
    DUF4696; Domain of unknown function (DUF4696)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20200522

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    57993536..58152305 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017021030.2XP_016876519.1  armadillo-like helical domain-containing protein 4 isoform X2

  2. XM_017021029.1XP_016876518.1  armadillo-like helical domain-containing protein 4 isoform X1

    UniProtKB/Swiss-Prot
    Q86TY3
    Conserved Domains (1) summary
    pfam15767
    Location:28604
    DUF4696; Domain of unknown function (DUF4696)
  3. XM_011536471.3XP_011534773.1  armadillo-like helical domain-containing protein 4 isoform X3

    Conserved Domains (1) summary
    pfam15767
    Location:28604
    DUF4696; Domain of unknown function (DUF4696)

RNA

  1. XR_943399.3 RNA Sequence

  2. XR_943398.3 RNA Sequence

  3. XR_943395.2 RNA Sequence

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