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sso7d chromatin protein Sso7d [ Saccharolobus solfataricus P2 ]

Gene ID: 1454006, updated on 31-Mar-2024
Gene symbol
sso7d
Gene description
chromatin protein Sso7d
Locus tag
SSO_RS12375
Gene type
protein coding
Organism
Saccharolobus solfataricus P2 (strain: P2)
Lineage
Archaea; Thermoproteota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus
Old locus tag
SSO10610
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Sequence:
NC_002754.1 (2320236..2320430)

NC_002754.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene APC family permease Neighboring gene hypothetical protein Neighboring gene S53 family peptidase Neighboring gene peptide-N4-asparagine amidase Neighboring gene amidohydrolase family protein

Genomic Sequence:
NC_002754.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Strong Enrichment of Aromatic Residues in Binding Sites from a Charge-neutralized Hyperthermostable Sso7d Scaffold Library. Traxlmayr MW, et al. J Biol Chem, 2016 Oct 21. PMID 27582495, Free PMC Article
  2. Phage display selection of tight specific binding variants from a hyperthermostable Sso7d scaffold protein library. Zhao N, et al. FEBS J, 2016 Apr. PMID 26835881
  3. Highly stable binding proteins derived from the hyperthermophilic Sso7d scaffold. Gera N, et al. J Mol Biol, 2011 Jun 17. PMID 21515282
  4. The Sso7d protein of Sulfolobus solfataricus: in vitro relationship among different activities. Guagliardi A, et al. Archaea, 2002 Sep. PMID 15803646, Free PMC Article
  5. Holliday junction resolution is modulated by archaeal chromatin components in vitro. Kvaratskhelia M, et al. J Biol Chem, 2002 Jan 25. PMID 11709558

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Despite the high frequency of aromatic residues, these rcSso7d-based binders are highly expressed, thermostable, and monomeric, suggesting that the hyperstability of the starting scaffold and the rigidness of the binding surface confer a high tolerance to mutation.
    Title: Strong Enrichment of Aromatic Residues in Binding Sites from a Charge-neutralized Hyperthermostable Sso7d Scaffold Library.
  2. Results suggest that the DNA binding protein Sso7d scaffold could be a complementary addition to the range of non-antibody scaffold proteins that may be utilized in phage display.
    Title: Phage display selection of tight specific binding variants from a hyperthermostable Sso7d scaffold protein library.
  3. Results describe the derivation of highly stable binding proteins from the hyperthermophilic Sso7d scaffold, which may have applicability in biotechnology and medicine.
    Title: Highly stable binding proteins derived from the hyperthermophilic Sso7d scaffold.
  4. Hydrolysis of ATP by Sso7d is independent of the binding of Sso7d to double-stranded DNA or protein aggregates.
    Title: The Sso7d protein of Sulfolobus solfataricus: in vitro relationship among different activities.
Submit: New GeneRIF Correction
Preferred Names
chromatin protein Sso7d

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002754.1 Reference assembly

    Range
    2320236..2320430
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_009990119.1 chromatin protein Sso7d [Saccharolobus solfataricus]

    See identical proteins and their annotated locations for WP_009990119.1

    UniProtKB/Swiss-Prot
    P39476, P81550
    UniProtKB/TrEMBL
    A0A0E3KA78, A0A157T5S7, D0KNM8
    Conserved Domains (1) summary
    pfam02294
    Location:3 → 61
    7kD_DNA_binding; 7kD DNA-binding domain
Protein Accession Links
GenPept Link UniProtKB Link
P39476.2

Gene LinkOut

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