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trmY tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY [ Methanocaldococcus jannaschii DSM 2661 ]

Gene ID: 1452549, updated on 27-Nov-2025
Gene symbol
trmY
Gene description
tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY
Locus tag
MJ_RS08730
Gene type
protein coding
Organism
Methanocaldococcus jannaschii DSM 2661 (strain: DSM 2661, type-material: type strain of Methanocaldococcus jannaschii)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Methanomada group; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus
Old locus tag
MJ1640; MJ_1640
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Sequence:
NC_000909.1 (1621048..1621665, complement)

NC_000909.1Genomic Context describing neighboring genes Neighboring gene ATP-binding protein Neighboring gene DUF7411 family protein Neighboring gene hypothetical protein Neighboring gene PhoU domain-containing protein Neighboring gene DUF2507 domain-containing protein Neighboring gene chromosome segregation protein SMC

Genomic Sequence:
NC_000909.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Crystal structure of Mj1640/DUF358 protein reveals a putative SPOUT-class RNA methyltransferase. Chen HY, et al. J Mol Cell Biol, 2010 Dec. PMID 21098051
  2. Identification of the enzyme responsible for N1-methylation of pseudouridine 54 in archaeal tRNAs. Wurm JP, et al. RNA, 2012 Mar. PMID 22274954, Free PMC Article
  3. The archaeal COG1901/DUF358 SPOUT-methyltransferase members, together with pseudouridine synthase Pus10, catalyze the formation of 1-methylpseudouridine at position 54 of tRNA. Chatterjee K, et al. RNA, 2012 Mar. PMID 22274953, Free PMC Article
  4. Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii. Bult CJ, et al. Science, 1996 Aug 23. PMID 8688087

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000909.1 Reference assembly

    Range
    1621048..1621665 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010871164.1 tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY

    See identical proteins and their annotated locations for WP_010871164.1

    UniProtKB/Swiss-Prot
    Q59034
    UniProtKB/TrEMBL
    A0A832T3K5
    Conserved Domains (1) summary
    PRK02135
    Location:1 → 204
    PRK02135; hypothetical protein; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q59034.1

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