Format

Send to:

Choose Destination

MJ_RS00900 DNA ligase [ Methanocaldococcus jannaschii DSM 2661 ]

Gene ID: 1451018, updated on 21-Apr-2017
Gene symbol
MJ_RS00900
Gene description
DNA ligase
Locus tag
MJ_RS00900
Gene type
protein coding
Organism
Methanocaldococcus jannaschii DSM 2661 (strain: DSM 2661)
Lineage
Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus
Old locus tag
MJ0171; MJ_0171
Sequence:
NC_000909.1 (173302..175023, complement)

NC_000909.1Genomic Context describing neighboring genes Neighboring gene septum site-determining protein MinD Neighboring gene mechanosensitive ion channel protein MscL Neighboring gene fibrillarin-like rRNA methylase Neighboring gene transcriptional regulator

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Base excision repair, organism-specific biosystem (from KEGG)
    Base excision repair, organism-specific biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • Base excision repair, conserved biosystem (from KEGG)
    Base excision repair, conserved biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • DNA replication, organism-specific biosystem (from KEGG)
    DNA replication, organism-specific biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
  • DNA replication, conserved biosystem (from KEGG)
    DNA replication, conserved biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
  • Mismatch repair, organism-specific biosystem (from KEGG)
    Mismatch repair, organism-specific biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
  • Mismatch repair, conserved biosystem (from KEGG)
    Mismatch repair, conserved biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
  • Nucleotide excision repair, organism-specific biosystem (from KEGG)
    Nucleotide excision repair, organism-specific biosystemNucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the ...
  • Nucleotide excision repair, conserved biosystem (from KEGG)
    Nucleotide excision repair, conserved biosystemNucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the ...

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000909.1 Reference assembly

    Range
    173302..175023 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010869666.1 DNA ligase [Methanocaldococcus jannaschii]

    See identical proteins and their annotated locations for WP_010869666.1

    UniProtKB/Swiss-Prot
    Q57635
    Conserved Domains (4) summary
    cd07972
    Location:444564
    OBF_DNA_ligase_Arch_LigB; The Oligonucleotide/oligosaccharide binding (OB)-fold domain of archaeal and bacterial ATP-dependent DNA ligases is a DNA-binding module that is part of the catalytic core unit
    cd07901
    Location:220442
    Adenylation_DNA_ligase_Arch_LigB; Adenylation domain of archaeal and bacterial LigB-like DNA ligases
    TIGR00574
    Location:61567
    dnl1; DNA ligase I, ATP-dependent (dnl1)
    pfam04675
    Location:4174
    DNA_ligase_A_N; DNA ligase N terminus
Support Center