U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TBLA0G01040 hypothetical protein [ Tetrapisispora blattae CBS 6284 ]

Gene ID: 14497183, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
TBLA0G01040
Gene description
hypothetical protein
Locus tag
TBLA_0G01040
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Tetrapisispora blattae CBS 6284 (strain: type strain:CBS 6284)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TBLA0G01040 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Sequence:
Chromosome: 7; NC_020191.1 (258966..261884, complement)

Chromosome 7 - NC_020191.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene tRNA-Arg

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_020191.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA ligase (ATP) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA ligation involved in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via nonhomologous end joining IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair, DNA gap filling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of DNA ligase IV complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
hypothetical protein
XP_004181570.1
  • similar to Saccharomyces cerevisiae DNL4 (YOR005C); ancestral locus Anc_6.18

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_020191.1 Reference assembly

    Range
    258966..261884 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004181522.1 → XP_004181570.1  hypothetical protein TBLA_0G01040 [Tetrapisispora blattae CBS 6284]

    See identical proteins and their annotated locations for XP_004181570.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I2H6P9
    Conserved Domains (5) summary
    cd07968
    Location:495 → 659
    OBF_DNA_ligase_IV; The Oligonucleotide/oligosaccharide binding (OB)-fold domain of ATP-dependent DNA ligase IV is a DNA-binding module that is part of the catalytic core unit
    cd07903
    Location:264 → 492
    Adenylation_DNA_ligase_IV; Adenylation domain of DNA Ligase IV
    TIGR00574
    Location:101 → 663
    dnl1; DNA ligase I, ATP-dependent (dnl1)
    pfam04675
    Location:32 → 224
    DNA_ligase_A_N; DNA ligase N terminus
    cl00038
    Location:713 → 802
    BRCT; Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases